{
  "generated_at": "2026-07-09 12:54:49 +0800",
  "dataset_id": "ds-cancerscem-2",
  "dataset_name": "CancerSCEM 2.0",
  "sample_id": "HGSOC-042-03-1A",
  "donor_id": "HGSOC-042-03-1A",
  "summary": {
    "sample_id": "HGSOC-042-03-1A",
    "donor_id": "HGSOC-042-03-1A",
    "cancer_type": "HGSOC",
    "health_status": "High-grade Serous Ovarian Carcinoma; Tumour",
    "tissue_or_cell_source": "Tumour",
    "cells_in_umap_file": 6277,
    "cells_analyzed": 2000,
    "clusters": 18,
    "genes_read": 27511,
    "genes_nonzero_in_analyzed_cells": 25396,
    "mean_umi": 6119,
    "mean_genes": 2507,
    "mean_pct_mito": 4.929,
    "matrix_status": "Matrix available",
    "detail_url": "human-immune-donor-detail.php?dataset_id=ds-cancerscem-2&donor_id=HGSOC-042-03-1A",
    "umap_href": "IMG/umap/cancerscem-2/donor/HGSOC-042-03-1A.png",
    "umap_coordinates_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/HGSOC-042-03-1A.umap.tsv.gz",
    "umap_summary_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/HGSOC-042-03-1A.summary.json"
  },
  "visualizations": [
    {
      "title": "Donor-level analysis panel",
      "href": "IMG/human-immune-analysis/cancerscem-deep/donor/HGSOC-042-03-1A.analysis.png",
      "description": "Cluster cell counts, cluster-by-program score heatmap, and top marker genes."
    }
  ],
  "cluster_qc": [
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "cells": 369,
      "mean_umi": 3796.6612,
      "median_genes": 1858,
      "mean_pct_mito": 5.8021
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "cells": 289,
      "mean_umi": 5647.083,
      "median_genes": 2389,
      "mean_pct_mito": 4.27
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "cells": 281,
      "mean_umi": 4952.9609,
      "median_genes": 2326,
      "mean_pct_mito": 6.1812
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "cells": 231,
      "mean_umi": 4280.4502,
      "median_genes": 2015,
      "mean_pct_mito": 6.0585
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "cells": 180,
      "mean_umi": 11001.4833,
      "median_genes": 3793.5,
      "mean_pct_mito": 5.2318
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "cells": 159,
      "mean_umi": 8413.8931,
      "median_genes": 3267,
      "mean_pct_mito": 3.2692
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "cells": 139,
      "mean_umi": 8552.5755,
      "median_genes": 3106,
      "mean_pct_mito": 5.1273
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "cells": 86,
      "mean_umi": 5432.093,
      "median_genes": 2353.5,
      "mean_pct_mito": 4.0002
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "cells": 65,
      "mean_umi": 2762.6154,
      "median_genes": 239,
      "mean_pct_mito": 0.6414
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "cells": 43,
      "mean_umi": 9310.8605,
      "median_genes": 3558,
      "mean_pct_mito": 3.9043
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "cells": 39,
      "mean_umi": 9112.2308,
      "median_genes": 3493,
      "mean_pct_mito": 2.5933
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "cells": 29,
      "mean_umi": 11927.8966,
      "median_genes": 3784,
      "mean_pct_mito": 4.6806
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "cells": 29,
      "mean_umi": 6849.8966,
      "median_genes": 2974,
      "mean_pct_mito": 4.1761
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "cells": 22,
      "mean_umi": 6671.8636,
      "median_genes": 2876.5,
      "mean_pct_mito": 4.9073
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "cells": 18,
      "mean_umi": 5501,
      "median_genes": 2231,
      "mean_pct_mito": 3.6997
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "cells": 8,
      "mean_umi": 6345.875,
      "median_genes": 1722.5,
      "mean_pct_mito": 5.1298
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "cells": 8,
      "mean_umi": 7856.75,
      "median_genes": 3312.5,
      "mean_pct_mito": 3.0646
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "cells": 5,
      "mean_umi": 2080.8,
      "median_genes": 864,
      "mean_pct_mito": 4.0698
    }
  ],
  "program_scores": [
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.9808
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5169
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.4054
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.3058
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.283
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.2237
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1542
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1532
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1281
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1214
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.12
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1069
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0955
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0914
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0875
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0668
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0566
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0535
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.4908
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3782
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3687
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3521
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3045
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2595
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2502
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2501
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2246
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1702
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1589
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1584
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1459
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1146
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0969
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0748
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0469
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0282
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.3032
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.2146
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.1839
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.1614
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0959
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0857
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0725
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0705
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0604
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0595
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0583
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0345
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0289
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0231
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0216
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0117
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0.0064
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Endothelial",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0497
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0284
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0118
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0056
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0051
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.003
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0022
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0019
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0018
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0017
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0014
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0013
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0009
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0315
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0269
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0252
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0227
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0201
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0193
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0188
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0158
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0121
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.011
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0109
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.01
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0075
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0013
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.2801
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.0949
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.9834
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.315
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.299
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2485
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2296
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1866
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1676
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1626
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1579
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1544
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1517
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1516
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1469
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1206
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1154
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0826
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.2167
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0495
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.049
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0359
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0319
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.027
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0222
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0211
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0198
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0157
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0157
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0152
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0147
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0142
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0131
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0124
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.003
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.96
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.8424
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.6795
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.6716
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.6094
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.4159
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.2585
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.2367
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.2194
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.2014
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.133
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.097
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0834
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0812
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0693
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0603
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0317
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0173
    }
  ],
  "program_summary": [
    {
      "program": "Myeloid_APC",
      "cluster_count": 18,
      "mean_score": 0.336,
      "max_score": 1.2801,
      "mean_genes_used": 9
    },
    {
      "program": "T_NK_cytotoxic",
      "cluster_count": 18,
      "mean_score": 0.3149,
      "max_score": 0.96,
      "mean_genes_used": 10
    },
    {
      "program": "B_plasma",
      "cluster_count": 18,
      "mean_score": 0.2195,
      "max_score": 0.9808,
      "mean_genes_used": 8
    },
    {
      "program": "Checkpoint_exhaustion",
      "cluster_count": 18,
      "mean_score": 0.2152,
      "max_score": 0.4908,
      "mean_genes_used": 8
    },
    {
      "program": "Endothelial",
      "cluster_count": 18,
      "mean_score": 0.0829,
      "max_score": 0.3032,
      "mean_genes_used": 6
    },
    {
      "program": "Proliferation",
      "cluster_count": 18,
      "mean_score": 0.0321,
      "max_score": 0.2167,
      "mean_genes_used": 7
    },
    {
      "program": "Fibroblast_stroma",
      "cluster_count": 18,
      "mean_score": 0.0129,
      "max_score": 0.0315,
      "mean_genes_used": 8
    },
    {
      "program": "Epithelial_tumor",
      "cluster_count": 18,
      "mean_score": 0.0064,
      "max_score": 0.0497,
      "mean_genes_used": 8
    }
  ],
  "top_markers": [
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "rank": 1,
      "gene": "HBB",
      "score_log1p_diff": 6.621,
      "mean_log1p_expr": 6.8614,
      "detect_fraction": 0.9692
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "rank": 1,
      "gene": "TCF4",
      "score_log1p_diff": 3.4289,
      "mean_log1p_expr": 3.6266,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "rank": 1,
      "gene": "FTH1",
      "score_log1p_diff": 3.3017,
      "mean_log1p_expr": 4.2277,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "rank": 1,
      "gene": "HLA-DRA",
      "score_log1p_diff": 3.1255,
      "mean_log1p_expr": 3.906,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "rank": 1,
      "gene": "VCAN",
      "score_log1p_diff": 3.0049,
      "mean_log1p_expr": 3.2646,
      "detect_fraction": 0.9784
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "rank": 1,
      "gene": "AFF3",
      "score_log1p_diff": 2.949,
      "mean_log1p_expr": 3.2793,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "rank": 1,
      "gene": "LRMDA",
      "score_log1p_diff": 2.8177,
      "mean_log1p_expr": 3.2292,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "rank": 1,
      "gene": "IL7R",
      "score_log1p_diff": 2.2405,
      "mean_log1p_expr": 2.9657,
      "detect_fraction": 0.9767
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "rank": 1,
      "gene": "THEMIS",
      "score_log1p_diff": 2.0887,
      "mean_log1p_expr": 3.0353,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "rank": 1,
      "gene": "LINC02694",
      "score_log1p_diff": 2.0338,
      "mean_log1p_expr": 2.243,
      "detect_fraction": 0.8889
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "rank": 1,
      "gene": "NCAM1",
      "score_log1p_diff": 1.9983,
      "mean_log1p_expr": 2.4071,
      "detect_fraction": 0.9655
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "rank": 1,
      "gene": "RPS27",
      "score_log1p_diff": 1.6777,
      "mean_log1p_expr": 2.6769,
      "detect_fraction": 0.9308
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "rank": 1,
      "gene": "LDB2",
      "score_log1p_diff": 1.6633,
      "mean_log1p_expr": 1.7054,
      "detect_fraction": 0.872
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "rank": 1,
      "gene": "SLC4A10",
      "score_log1p_diff": 1.369,
      "mean_log1p_expr": 1.4909,
      "detect_fraction": 0.8541
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "rank": 1,
      "gene": "AOAH",
      "score_log1p_diff": 1.3266,
      "mean_log1p_expr": 2.7445,
      "detect_fraction": 0.9884
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "rank": 1,
      "gene": "AKAP12",
      "score_log1p_diff": 1.2281,
      "mean_log1p_expr": 1.2348,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "rank": 1,
      "gene": "THEMIS",
      "score_log1p_diff": 0.8838,
      "mean_log1p_expr": 1.7081,
      "detect_fraction": 0.878
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "rank": 1,
      "gene": "ADAM19",
      "score_log1p_diff": 0.817,
      "mean_log1p_expr": 1.208,
      "detect_fraction": 0.8009
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "rank": 2,
      "gene": "HBA2",
      "score_log1p_diff": 5.1232,
      "mean_log1p_expr": 5.2129,
      "detect_fraction": 0.9692
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "rank": 2,
      "gene": "AC023590.1",
      "score_log1p_diff": 3.099,
      "mean_log1p_expr": 3.1557,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "rank": 2,
      "gene": "TPSB2",
      "score_log1p_diff": 3.0881,
      "mean_log1p_expr": 3.0899,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "rank": 2,
      "gene": "CD74",
      "score_log1p_diff": 2.9332,
      "mean_log1p_expr": 3.9204,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "rank": 2,
      "gene": "RBM47",
      "score_log1p_diff": 2.7544,
      "mean_log1p_expr": 3.0979,
      "detect_fraction": 0.9889
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "rank": 2,
      "gene": "BANK1",
      "score_log1p_diff": 2.7536,
      "mean_log1p_expr": 2.8224,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "rank": 2,
      "gene": "ZEB2",
      "score_log1p_diff": 2.4498,
      "mean_log1p_expr": 3.5993,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "rank": 2,
      "gene": "CCL5",
      "score_log1p_diff": 2.0759,
      "mean_log1p_expr": 2.8514,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "rank": 2,
      "gene": "SLC4A10",
      "score_log1p_diff": 1.9363,
      "mean_log1p_expr": 2.2089,
      "detect_fraction": 0.9535
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "rank": 2,
      "gene": "GNLY",
      "score_log1p_diff": 1.7549,
      "mean_log1p_expr": 1.9133,
      "detect_fraction": 0.8966
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "rank": 2,
      "gene": "AOAH",
      "score_log1p_diff": 1.6369,
      "mean_log1p_expr": 2.8753,
      "detect_fraction": 0.9965
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "rank": 2,
      "gene": "IKZF2",
      "score_log1p_diff": 1.5073,
      "mean_log1p_expr": 1.8738,
      "detect_fraction": 0.8889
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "rank": 2,
      "gene": "RPL41",
      "score_log1p_diff": 1.4991,
      "mean_log1p_expr": 2.4862,
      "detect_fraction": 0.9245
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "rank": 2,
      "gene": "AL136456.1",
      "score_log1p_diff": 1.3024,
      "mean_log1p_expr": 1.6472,
      "detect_fraction": 0.7331
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "rank": 2,
      "gene": "C1orf21",
      "score_log1p_diff": 1.1912,
      "mean_log1p_expr": 1.4989,
      "detect_fraction": 0.8605
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "rank": 2,
      "gene": "LINC02458",
      "score_log1p_diff": 0.9272,
      "mean_log1p_expr": 0.9364,
      "detect_fraction": 0.6
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "rank": 2,
      "gene": "BCL2",
      "score_log1p_diff": 0.8024,
      "mean_log1p_expr": 2.3042,
      "detect_fraction": 0.9134
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "rank": 2,
      "gene": "BCL11B",
      "score_log1p_diff": 0.4565,
      "mean_log1p_expr": 1.6009,
      "detect_fraction": 0.916
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "rank": 3,
      "gene": "HBA1",
      "score_log1p_diff": 4.3889,
      "mean_log1p_expr": 4.432,
      "detect_fraction": 0.9538
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "rank": 3,
      "gene": "LINC01478",
      "score_log1p_diff": 3.069,
      "mean_log1p_expr": 3.087,
      "detect_fraction": 0.9545
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "rank": 3,
      "gene": "S100A6",
      "score_log1p_diff": 2.9089,
      "mean_log1p_expr": 3.6193,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "rank": 3,
      "gene": "ZEB2",
      "score_log1p_diff": 2.7066,
      "mean_log1p_expr": 3.7828,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "rank": 3,
      "gene": "CST3",
      "score_log1p_diff": 2.6828,
      "mean_log1p_expr": 3.2928,
      "detect_fraction": 0.9655
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "rank": 3,
      "gene": "PLXDC2",
      "score_log1p_diff": 2.3892,
      "mean_log1p_expr": 2.8389,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "rank": 3,
      "gene": "RALGPS2",
      "score_log1p_diff": 2.1806,
      "mean_log1p_expr": 2.2638,
      "detect_fraction": 0.875
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "rank": 3,
      "gene": "RPS27",
      "score_log1p_diff": 1.9199,
      "mean_log1p_expr": 3.0113,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "rank": 3,
      "gene": "IL32",
      "score_log1p_diff": 1.7188,
      "mean_log1p_expr": 2.3017,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "rank": 3,
      "gene": "NCALD",
      "score_log1p_diff": 1.5626,
      "mean_log1p_expr": 2.3792,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "rank": 3,
      "gene": "TOX",
      "score_log1p_diff": 1.501,
      "mean_log1p_expr": 2.3978,
      "detect_fraction": 0.9862
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "rank": 3,
      "gene": "RPS18",
      "score_log1p_diff": 1.4605,
      "mean_log1p_expr": 2.2563,
      "detect_fraction": 0.9308
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "rank": 3,
      "gene": "PLCL1",
      "score_log1p_diff": 1.4198,
      "mean_log1p_expr": 1.7851,
      "detect_fraction": 0.9444
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "rank": 3,
      "gene": "BCL2",
      "score_log1p_diff": 1.3001,
      "mean_log1p_expr": 2.7119,
      "detect_fraction": 0.9893
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "rank": 3,
      "gene": "TGFBR3",
      "score_log1p_diff": 1.1154,
      "mean_log1p_expr": 1.6447,
      "detect_fraction": 0.8953
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "rank": 3,
      "gene": "FRY",
      "score_log1p_diff": 0.847,
      "mean_log1p_expr": 1.0694,
      "detect_fraction": 0.8
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "rank": 3,
      "gene": "INPP4B",
      "score_log1p_diff": 0.741,
      "mean_log1p_expr": 1.5612,
      "detect_fraction": 0.9091
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "rank": 3,
      "gene": "INPP4B",
      "score_log1p_diff": 0.4251,
      "mean_log1p_expr": 1.2524,
      "detect_fraction": 0.8076
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "rank": 4,
      "gene": "BCL11A",
      "score_log1p_diff": 2.9878,
      "mean_log1p_expr": 3.0506,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "rank": 4,
      "gene": "TPSAB1",
      "score_log1p_diff": 2.7727,
      "mean_log1p_expr": 2.7734,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "rank": 4,
      "gene": "HLA-DRB1",
      "score_log1p_diff": 2.6378,
      "mean_log1p_expr": 3.0624,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "rank": 4,
      "gene": "FTL",
      "score_log1p_diff": 2.5047,
      "mean_log1p_expr": 3.697,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "rank": 4,
      "gene": "RBM47",
      "score_log1p_diff": 2.2986,
      "mean_log1p_expr": 2.7302,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "rank": 4,
      "gene": "BACH2",
      "score_log1p_diff": 2.0817,
      "mean_log1p_expr": 2.5366,
      "detect_fraction": 0.75
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "rank": 4,
      "gene": "RPLP1",
      "score_log1p_diff": 1.7911,
      "mean_log1p_expr": 3.0245,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "rank": 4,
      "gene": "TOX",
      "score_log1p_diff": 1.6685,
      "mean_log1p_expr": 2.7496,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_2",
      "rank": 4,
      "gene": "NCAM1",
      "score_log1p_diff": 1.4999,
      "mean_log1p_expr": 1.7209,
      "detect_fraction": 0.8893
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_13",
      "rank": 4,
      "gene": "ZMAT4",
      "score_log1p_diff": 1.4925,
      "mean_log1p_expr": 1.5004,
      "detect_fraction": 0.8966
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_15",
      "rank": 4,
      "gene": "ARID5B",
      "score_log1p_diff": 1.4043,
      "mean_log1p_expr": 2.1475,
      "detect_fraction": 0.9444
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_6",
      "rank": 4,
      "gene": "RPS12",
      "score_log1p_diff": 1.3935,
      "mean_log1p_expr": 2.3285,
      "detect_fraction": 0.9371
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_3",
      "rank": 4,
      "gene": "IL7R",
      "score_log1p_diff": 1.1928,
      "mean_log1p_expr": 1.7986,
      "detect_fraction": 0.9359
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_9",
      "rank": 4,
      "gene": "UBB",
      "score_log1p_diff": 1.1272,
      "mean_log1p_expr": 1.5477,
      "detect_fraction": 0.8154
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_8",
      "rank": 4,
      "gene": "GNLY",
      "score_log1p_diff": 1.0715,
      "mean_log1p_expr": 1.2094,
      "detect_fraction": 0.7791
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_18",
      "rank": 4,
      "gene": "CLC",
      "score_log1p_diff": 0.8175,
      "mean_log1p_expr": 0.8189,
      "detect_fraction": 0.8
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_4",
      "rank": 4,
      "gene": "POLR2A",
      "score_log1p_diff": 0.7239,
      "mean_log1p_expr": 1.8266,
      "detect_fraction": 0.9264
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_1",
      "rank": 4,
      "gene": "PRKCH",
      "score_log1p_diff": 0.4067,
      "mean_log1p_expr": 2.1715,
      "detect_fraction": 0.9783
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_14",
      "rank": 5,
      "gene": "FCHSD2",
      "score_log1p_diff": 2.7464,
      "mean_log1p_expr": 3.6072,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_16",
      "rank": 5,
      "gene": "VIM",
      "score_log1p_diff": 2.7109,
      "mean_log1p_expr": 3.4561,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_12",
      "rank": 5,
      "gene": "HLA-DPA1",
      "score_log1p_diff": 2.6262,
      "mean_log1p_expr": 2.9985,
      "detect_fraction": 0.8966
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_5",
      "rank": 5,
      "gene": "FN1",
      "score_log1p_diff": 2.4502,
      "mean_log1p_expr": 2.8775,
      "detect_fraction": 0.9389
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_7",
      "rank": 5,
      "gene": "SLC8A1",
      "score_log1p_diff": 2.241,
      "mean_log1p_expr": 2.6596,
      "detect_fraction": 0.9712
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_17",
      "rank": 5,
      "gene": "PAX5",
      "score_log1p_diff": 1.8316,
      "mean_log1p_expr": 1.833,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_10",
      "rank": 5,
      "gene": "RPL13",
      "score_log1p_diff": 1.7819,
      "mean_log1p_expr": 3.102,
      "detect_fraction": 1
    },
    {
      "sample_id": "HGSOC-042-03-1A",
      "cluster": "cluster_11",
      "rank": 5,
      "gene": "PPP2R2B",
      "score_log1p_diff": 1.616,
      "mean_log1p_expr": 2.2615,
      "detect_fraction": 0.9744
    }
  ],
  "source_tables": {
    "sample_index": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_sample_index.tsv",
    "cluster_qc": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_qc.tsv",
    "program_scores": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_program_scores.tsv",
    "cluster_markers": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_markers.tsv"
  }
}
