{
  "generated_at": "2026-07-09 12:54:49 +0800",
  "dataset_id": "ds-cancerscem-2",
  "dataset_name": "CancerSCEM 2.0",
  "sample_id": "HNSCC-127-02-1A",
  "donor_id": "HNSCC-127-02-1A",
  "summary": {
    "sample_id": "HNSCC-127-02-1A",
    "donor_id": "HNSCC-127-02-1A",
    "cancer_type": "HNSCC",
    "health_status": "Head and Neck Squamous Cell Carcinoma; Tumour",
    "tissue_or_cell_source": "Tumour",
    "cells_in_umap_file": 4180,
    "cells_analyzed": 2000,
    "clusters": 18,
    "genes_read": 27093,
    "genes_nonzero_in_analyzed_cells": 25176,
    "mean_umi": 7146,
    "mean_genes": 2396,
    "mean_pct_mito": 2.588,
    "matrix_status": "Matrix available",
    "detail_url": "human-immune-donor-detail.php?dataset_id=ds-cancerscem-2&donor_id=HNSCC-127-02-1A",
    "umap_href": "IMG/umap/cancerscem-2/donor/HNSCC-127-02-1A.png",
    "umap_coordinates_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/HNSCC-127-02-1A.umap.tsv.gz",
    "umap_summary_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/HNSCC-127-02-1A.summary.json"
  },
  "visualizations": [
    {
      "title": "Donor-level analysis panel",
      "href": "IMG/human-immune-analysis/cancerscem-deep/donor/HNSCC-127-02-1A.analysis.png",
      "description": "Cluster cell counts, cluster-by-program score heatmap, and top marker genes."
    }
  ],
  "cluster_qc": [
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "cells": 402,
      "mean_umi": 6905.7761,
      "median_genes": 2436.5,
      "mean_pct_mito": 2.8656
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "cells": 313,
      "mean_umi": 7404.5719,
      "median_genes": 2652,
      "mean_pct_mito": 2.7553
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "cells": 283,
      "mean_umi": 6433.2933,
      "median_genes": 2418,
      "mean_pct_mito": 2.531
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "cells": 163,
      "mean_umi": 5568.7485,
      "median_genes": 2180,
      "mean_pct_mito": 3.6333
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "cells": 120,
      "mean_umi": 2179.85,
      "median_genes": 887,
      "mean_pct_mito": 0.2466
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "cells": 101,
      "mean_umi": 8958.198,
      "median_genes": 2984,
      "mean_pct_mito": 3.124
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "cells": 96,
      "mean_umi": 9535.1771,
      "median_genes": 3281.5,
      "mean_pct_mito": 2.896
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "cells": 88,
      "mean_umi": 9937.1705,
      "median_genes": 1841.5,
      "mean_pct_mito": 2.0493
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "cells": 88,
      "mean_umi": 9881.3068,
      "median_genes": 3348.5,
      "mean_pct_mito": 3.345
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "cells": 80,
      "mean_umi": 9826.3375,
      "median_genes": 3168,
      "mean_pct_mito": 2.7708
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "cells": 64,
      "mean_umi": 2613.2812,
      "median_genes": 713.5,
      "mean_pct_mito": 1.2861
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "cells": 50,
      "mean_umi": 16311.06,
      "median_genes": 3872.5,
      "mean_pct_mito": 3.0287
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "cells": 47,
      "mean_umi": 2294.6596,
      "median_genes": 678,
      "mean_pct_mito": 1.3078
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "cells": 27,
      "mean_umi": 9655.5926,
      "median_genes": 3491,
      "mean_pct_mito": 2.6777
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "cells": 23,
      "mean_umi": 8824.6522,
      "median_genes": 2737,
      "mean_pct_mito": 3.512
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "cells": 20,
      "mean_umi": 6369.1,
      "median_genes": 249,
      "mean_pct_mito": 1.006
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "cells": 18,
      "mean_umi": 1602.4444,
      "median_genes": 651.5,
      "mean_pct_mito": 0.1269
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "cells": 17,
      "mean_umi": 8692.2941,
      "median_genes": 2534,
      "mean_pct_mito": 3.7427
    }
  ],
  "program_scores": [
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 1.3506
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 1.2405
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.3773
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.2623
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.2324
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.2149
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1854
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1804
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1571
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1559
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1483
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1465
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1254
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1077
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1057
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0956
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0502
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0361
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.8223
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.7991
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.718
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.6786
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3217
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3116
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2274
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2079
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1645
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1591
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.144
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1056
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0762
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.069
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0571
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0535
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0167
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0048
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.566
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.1066
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0992
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0721
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0341
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.033
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0279
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0258
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0247
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0176
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.014
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.013
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0111
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0099
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0099
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0076
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0058
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.7885
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.6613
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0981
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0771
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0533
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0459
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0458
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.044
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0436
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0404
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0389
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.038
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0372
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0342
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0333
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0315
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.031
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0295
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 1.5034
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1711
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1653
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.157
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1545
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1537
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1525
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1516
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1506
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1505
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1492
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1391
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1378
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1337
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1286
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1272
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.119
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.1079
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.2268
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.9802
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.4995
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.4629
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.3526
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2409
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1996
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1847
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.168
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1429
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1176
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0987
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0839
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0833
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0754
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0742
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0683
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0354
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 1.1636
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.2249
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.2041
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.2023
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.1532
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.1269
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.1091
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.1062
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0997
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0936
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0827
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0802
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.072
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.066
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0433
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0359
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0256
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.022
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 2.0083
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 1.3579
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 1.3477
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 1.1231
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 1.0792
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.6729
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.5398
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.4413
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.4329
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.4323
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.4137
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0859
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0792
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0598
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0392
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0392
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0285
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0215
    }
  ],
  "program_summary": [
    {
      "program": "T_NK_cytotoxic",
      "cluster_count": 18,
      "mean_score": 0.5668,
      "max_score": 2.0083,
      "mean_genes_used": 10
    },
    {
      "program": "B_plasma",
      "cluster_count": 18,
      "mean_score": 0.2874,
      "max_score": 1.3506,
      "mean_genes_used": 8
    },
    {
      "program": "Myeloid_APC",
      "cluster_count": 18,
      "mean_score": 0.2831,
      "max_score": 1.2268,
      "mean_genes_used": 9
    },
    {
      "program": "Checkpoint_exhaustion",
      "cluster_count": 18,
      "mean_score": 0.2743,
      "max_score": 0.8223,
      "mean_genes_used": 8
    },
    {
      "program": "Fibroblast_stroma",
      "cluster_count": 18,
      "mean_score": 0.2196,
      "max_score": 1.5034,
      "mean_genes_used": 8
    },
    {
      "program": "Proliferation",
      "cluster_count": 18,
      "mean_score": 0.1617,
      "max_score": 1.1636,
      "mean_genes_used": 7
    },
    {
      "program": "Epithelial_tumor",
      "cluster_count": 18,
      "mean_score": 0.1206,
      "max_score": 0.7885,
      "mean_genes_used": 8
    },
    {
      "program": "Endothelial",
      "cluster_count": 18,
      "mean_score": 0.0599,
      "max_score": 0.566,
      "mean_genes_used": 7
    }
  ],
  "top_markers": [
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "rank": 1,
      "gene": "HBB",
      "score_log1p_diff": 6.7035,
      "mean_log1p_expr": 6.7492,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "rank": 1,
      "gene": "S100A8",
      "score_log1p_diff": 3.7462,
      "mean_log1p_expr": 3.8738,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "rank": 1,
      "gene": "GNLY",
      "score_log1p_diff": 3.4819,
      "mean_log1p_expr": 4.0747,
      "detect_fraction": 0.9773
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "rank": 1,
      "gene": "GNLY",
      "score_log1p_diff": 3.2148,
      "mean_log1p_expr": 3.7985,
      "detect_fraction": 0.901
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "rank": 1,
      "gene": "CD74",
      "score_log1p_diff": 3.14,
      "mean_log1p_expr": 4.2502,
      "detect_fraction": 0.98
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "rank": 1,
      "gene": "CXCL8",
      "score_log1p_diff": 3.0475,
      "mean_log1p_expr": 3.3478,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "rank": 1,
      "gene": "KRT14",
      "score_log1p_diff": 2.8017,
      "mean_log1p_expr": 3.0016,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "rank": 1,
      "gene": "CXCL13",
      "score_log1p_diff": 2.7187,
      "mean_log1p_expr": 2.8162,
      "detect_fraction": 0.875
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "rank": 1,
      "gene": "COL1A1",
      "score_log1p_diff": 2.7179,
      "mean_log1p_expr": 2.9672,
      "detect_fraction": 0.913
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "rank": 1,
      "gene": "IGKC",
      "score_log1p_diff": 2.5817,
      "mean_log1p_expr": 2.6899,
      "detect_fraction": 0.7059
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "rank": 1,
      "gene": "HLA-DRA",
      "score_log1p_diff": 2.4624,
      "mean_log1p_expr": 3.174,
      "detect_fraction": 0.9545
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "rank": 1,
      "gene": "IKZF2",
      "score_log1p_diff": 2.0559,
      "mean_log1p_expr": 2.4135,
      "detect_fraction": 0.9875
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "rank": 1,
      "gene": "IGFBP7",
      "score_log1p_diff": 2.0342,
      "mean_log1p_expr": 2.1839,
      "detect_fraction": 0.9688
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "rank": 1,
      "gene": "HMGB2",
      "score_log1p_diff": 2.0098,
      "mean_log1p_expr": 2.45,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "rank": 1,
      "gene": "CCL5",
      "score_log1p_diff": 1.8055,
      "mean_log1p_expr": 2.5842,
      "detect_fraction": 0.9744
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "rank": 1,
      "gene": "ANK3",
      "score_log1p_diff": 1.0913,
      "mean_log1p_expr": 1.6056,
      "detect_fraction": 0.7886
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "rank": 1,
      "gene": "IKZF2",
      "score_log1p_diff": 1.0217,
      "mean_log1p_expr": 1.317,
      "detect_fraction": 0.7385
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "rank": 1,
      "gene": "HSPA1A",
      "score_log1p_diff": 0.9343,
      "mean_log1p_expr": 1.4976,
      "detect_fraction": 0.7853
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "rank": 2,
      "gene": "HBA2",
      "score_log1p_diff": 6.1621,
      "mean_log1p_expr": 6.2132,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "rank": 2,
      "gene": "S100A9",
      "score_log1p_diff": 3.5737,
      "mean_log1p_expr": 3.76,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "rank": 2,
      "gene": "GPR183",
      "score_log1p_diff": 3.0992,
      "mean_log1p_expr": 3.9052,
      "detect_fraction": 0.96
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "rank": 2,
      "gene": "CALD1",
      "score_log1p_diff": 2.58,
      "mean_log1p_expr": 2.6811,
      "detect_fraction": 0.9565
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "rank": 2,
      "gene": "S100A2",
      "score_log1p_diff": 2.4468,
      "mean_log1p_expr": 2.6784,
      "detect_fraction": 0.9917
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "rank": 2,
      "gene": "CCL5",
      "score_log1p_diff": 2.2754,
      "mean_log1p_expr": 3.2365,
      "detect_fraction": 0.9432
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "rank": 2,
      "gene": "HLA-DRA",
      "score_log1p_diff": 2.0857,
      "mean_log1p_expr": 2.888,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "rank": 2,
      "gene": "FTL",
      "score_log1p_diff": 1.9496,
      "mean_log1p_expr": 3.5228,
      "detect_fraction": 0.9545
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "rank": 2,
      "gene": "GNLY",
      "score_log1p_diff": 1.8783,
      "mean_log1p_expr": 2.599,
      "detect_fraction": 0.7778
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "rank": 2,
      "gene": "IL1B",
      "score_log1p_diff": 1.8662,
      "mean_log1p_expr": 2.0068,
      "detect_fraction": 0.8298
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "rank": 2,
      "gene": "BATF",
      "score_log1p_diff": 1.7099,
      "mean_log1p_expr": 2.1299,
      "detect_fraction": 0.9625
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "rank": 2,
      "gene": "SNX9",
      "score_log1p_diff": 1.6518,
      "mean_log1p_expr": 2.4908,
      "detect_fraction": 0.9792
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "rank": 2,
      "gene": "NKG7",
      "score_log1p_diff": 1.6371,
      "mean_log1p_expr": 2.199,
      "detect_fraction": 0.8713
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "rank": 2,
      "gene": "COL4A1",
      "score_log1p_diff": 1.5115,
      "mean_log1p_expr": 1.6261,
      "detect_fraction": 0.8125
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "rank": 2,
      "gene": "NKG7",
      "score_log1p_diff": 1.3373,
      "mean_log1p_expr": 1.7726,
      "detect_fraction": 0.9042
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "rank": 2,
      "gene": "MALAT1",
      "score_log1p_diff": 0.9397,
      "mean_log1p_expr": 5.8936,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "rank": 2,
      "gene": "IL7R",
      "score_log1p_diff": 0.9126,
      "mean_log1p_expr": 1.6279,
      "detect_fraction": 0.8234
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "rank": 2,
      "gene": "FOSB",
      "score_log1p_diff": 0.8611,
      "mean_log1p_expr": 1.5645,
      "detect_fraction": 0.8773
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "rank": 3,
      "gene": "HBA1",
      "score_log1p_diff": 5.0711,
      "mean_log1p_expr": 5.088,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "rank": 3,
      "gene": "TCF4",
      "score_log1p_diff": 3.0681,
      "mean_log1p_expr": 3.2109,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "rank": 3,
      "gene": "KRT17",
      "score_log1p_diff": 2.8381,
      "mean_log1p_expr": 3.0682,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "rank": 3,
      "gene": "COL1A2",
      "score_log1p_diff": 2.481,
      "mean_log1p_expr": 2.7215,
      "detect_fraction": 0.913
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "rank": 3,
      "gene": "KRT5",
      "score_log1p_diff": 2.1898,
      "mean_log1p_expr": 2.3041,
      "detect_fraction": 0.975
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "rank": 3,
      "gene": "GZMA",
      "score_log1p_diff": 2.1628,
      "mean_log1p_expr": 2.7004,
      "detect_fraction": 0.9659
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "rank": 3,
      "gene": "MEF2C",
      "score_log1p_diff": 1.9447,
      "mean_log1p_expr": 2.05,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "rank": 3,
      "gene": "HIST1H4C",
      "score_log1p_diff": 1.8513,
      "mean_log1p_expr": 2.3826,
      "detect_fraction": 0.8519
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "rank": 3,
      "gene": "CXCL8",
      "score_log1p_diff": 1.8317,
      "mean_log1p_expr": 2.123,
      "detect_fraction": 0.75
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "rank": 3,
      "gene": "S100A9",
      "score_log1p_diff": 1.7169,
      "mean_log1p_expr": 1.895,
      "detect_fraction": 0.7872
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "rank": 3,
      "gene": "ICOS",
      "score_log1p_diff": 1.6997,
      "mean_log1p_expr": 2.4325,
      "detect_fraction": 0.975
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "rank": 3,
      "gene": "XCL2",
      "score_log1p_diff": 1.517,
      "mean_log1p_expr": 1.6212,
      "detect_fraction": 0.7822
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "rank": 3,
      "gene": "CBLB",
      "score_log1p_diff": 1.5078,
      "mean_log1p_expr": 2.5145,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "rank": 3,
      "gene": "GZMK",
      "score_log1p_diff": 1.1475,
      "mean_log1p_expr": 1.4563,
      "detect_fraction": 0.8275
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "rank": 3,
      "gene": "SPARC",
      "score_log1p_diff": 1.0992,
      "mean_log1p_expr": 1.275,
      "detect_fraction": 0.9062
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "rank": 3,
      "gene": "SMCHD1",
      "score_log1p_diff": 0.9353,
      "mean_log1p_expr": 2.3722,
      "detect_fraction": 0.9753
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "rank": 3,
      "gene": "GALM",
      "score_log1p_diff": 0.8115,
      "mean_log1p_expr": 1.4125,
      "detect_fraction": 0.8282
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "rank": 3,
      "gene": "P2RY8",
      "score_log1p_diff": 0.769,
      "mean_log1p_expr": 1.5049,
      "detect_fraction": 0.8383
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "rank": 4,
      "gene": "FCHSD2",
      "score_log1p_diff": 2.8822,
      "mean_log1p_expr": 3.3402,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "rank": 4,
      "gene": "KRT16",
      "score_log1p_diff": 2.8135,
      "mean_log1p_expr": 2.8481,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "rank": 4,
      "gene": "SPARC",
      "score_log1p_diff": 2.4259,
      "mean_log1p_expr": 2.6089,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "rank": 4,
      "gene": "KRT17",
      "score_log1p_diff": 2.1821,
      "mean_log1p_expr": 2.3068,
      "detect_fraction": 0.9583
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "rank": 4,
      "gene": "GZMB",
      "score_log1p_diff": 1.9929,
      "mean_log1p_expr": 2.5168,
      "detect_fraction": 0.9091
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "rank": 4,
      "gene": "CD74",
      "score_log1p_diff": 1.7838,
      "mean_log1p_expr": 2.9573,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "rank": 4,
      "gene": "IFI30",
      "score_log1p_diff": 1.758,
      "mean_log1p_expr": 1.8518,
      "detect_fraction": 0.8977
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "rank": 4,
      "gene": "SOD2",
      "score_log1p_diff": 1.6775,
      "mean_log1p_expr": 2.5121,
      "detect_fraction": 0.9574
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_10",
      "rank": 4,
      "gene": "TNFRSF4",
      "score_log1p_diff": 1.6672,
      "mean_log1p_expr": 1.8071,
      "detect_fraction": 0.875
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_14",
      "rank": 4,
      "gene": "HMGB1",
      "score_log1p_diff": 1.5864,
      "mean_log1p_expr": 2.734,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_7",
      "rank": 4,
      "gene": "PDE3B",
      "score_log1p_diff": 1.4919,
      "mean_log1p_expr": 3.0167,
      "detect_fraction": 0.9896
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_6",
      "rank": 4,
      "gene": "CNOT2",
      "score_log1p_diff": 1.4852,
      "mean_log1p_expr": 2.256,
      "detect_fraction": 0.9406
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_16",
      "rank": 4,
      "gene": "SLC25A37",
      "score_log1p_diff": 1.1626,
      "mean_log1p_expr": 1.2826,
      "detect_fraction": 0.8
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_11",
      "rank": 4,
      "gene": "IFI27",
      "score_log1p_diff": 1.0982,
      "mean_log1p_expr": 1.4782,
      "detect_fraction": 0.9062
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_2",
      "rank": 4,
      "gene": "CXCR4",
      "score_log1p_diff": 1.0738,
      "mean_log1p_expr": 2.3904,
      "detect_fraction": 0.9393
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_3",
      "rank": 4,
      "gene": "RTKN2",
      "score_log1p_diff": 0.8783,
      "mean_log1p_expr": 1.0157,
      "detect_fraction": 0.6714
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_4",
      "rank": 4,
      "gene": "FOS",
      "score_log1p_diff": 0.8115,
      "mean_log1p_expr": 1.7153,
      "detect_fraction": 0.8528
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_1",
      "rank": 4,
      "gene": "CXCR4",
      "score_log1p_diff": 0.7407,
      "mean_log1p_expr": 2.0765,
      "detect_fraction": 0.8955
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_12",
      "rank": 5,
      "gene": "IRF4",
      "score_log1p_diff": 2.8649,
      "mean_log1p_expr": 3.2202,
      "detect_fraction": 0.94
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_17",
      "rank": 5,
      "gene": "KRT14",
      "score_log1p_diff": 2.7821,
      "mean_log1p_expr": 3.125,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_15",
      "rank": 5,
      "gene": "IGFBP7",
      "score_log1p_diff": 2.2453,
      "mean_log1p_expr": 2.4343,
      "detect_fraction": 1
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_8",
      "rank": 5,
      "gene": "PDE3B",
      "score_log1p_diff": 1.7431,
      "mean_log1p_expr": 3.2628,
      "detect_fraction": 0.9886
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_18",
      "rank": 5,
      "gene": "BANK1",
      "score_log1p_diff": 1.7369,
      "mean_log1p_expr": 1.7514,
      "detect_fraction": 0.9412
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_5",
      "rank": 5,
      "gene": "MT2A",
      "score_log1p_diff": 1.7289,
      "mean_log1p_expr": 2.7198,
      "detect_fraction": 0.9833
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_9",
      "rank": 5,
      "gene": "CD74",
      "score_log1p_diff": 1.7281,
      "mean_log1p_expr": 2.8407,
      "detect_fraction": 0.9773
    },
    {
      "sample_id": "HNSCC-127-02-1A",
      "cluster": "cluster_13",
      "rank": 5,
      "gene": "PLEK",
      "score_log1p_diff": 1.6746,
      "mean_log1p_expr": 1.8339,
      "detect_fraction": 0.8723
    }
  ],
  "source_tables": {
    "sample_index": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_sample_index.tsv",
    "cluster_qc": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_qc.tsv",
    "program_scores": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_program_scores.tsv",
    "cluster_markers": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_markers.tsv"
  }
}
