{
  "generated_at": "2026-07-09 12:54:49 +0800",
  "dataset_id": "ds-cancerscem-2",
  "dataset_name": "CancerSCEM 2.0",
  "sample_id": "PDAC-046-09-1A",
  "donor_id": "PDAC-046-09-1A",
  "summary": {
    "sample_id": "PDAC-046-09-1A",
    "donor_id": "PDAC-046-09-1A",
    "cancer_type": "PDAC",
    "health_status": "Pancreatic Ductal Adenocarcinoma; Normal",
    "tissue_or_cell_source": "Normal",
    "cells_in_umap_file": 689,
    "cells_analyzed": 689,
    "clusters": 11,
    "genes_read": 23045,
    "genes_nonzero_in_analyzed_cells": 21418,
    "mean_umi": 18250,
    "mean_genes": 2170,
    "mean_pct_mito": 5.402,
    "matrix_status": "Matrix available",
    "detail_url": "human-immune-donor-detail.php?dataset_id=ds-cancerscem-2&donor_id=PDAC-046-09-1A",
    "umap_href": "IMG/umap/cancerscem-2/donor/PDAC-046-09-1A.png",
    "umap_coordinates_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/PDAC-046-09-1A.umap.tsv.gz",
    "umap_summary_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/PDAC-046-09-1A.summary.json"
  },
  "visualizations": [
    {
      "title": "Donor-level analysis panel",
      "href": "IMG/human-immune-analysis/cancerscem-deep/donor/PDAC-046-09-1A.analysis.png",
      "description": "Cluster cell counts, cluster-by-program score heatmap, and top marker genes."
    }
  ],
  "cluster_qc": [
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "cells": 151,
      "mean_umi": 19288.8212,
      "median_genes": 957,
      "mean_pct_mito": 2.8203
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "cells": 116,
      "mean_umi": 6039.9138,
      "median_genes": 2276.5,
      "mean_pct_mito": 6.8898
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "cells": 101,
      "mean_umi": 54325.5644,
      "median_genes": 3859,
      "mean_pct_mito": 7.2632
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "cells": 84,
      "mean_umi": 8818.5595,
      "median_genes": 2989.5,
      "mean_pct_mito": 6.3662
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "cells": 56,
      "mean_umi": 8157.8214,
      "median_genes": 842,
      "mean_pct_mito": 3.4242
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "cells": 47,
      "mean_umi": 6983.8936,
      "median_genes": 1372,
      "mean_pct_mito": 6.1343
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "cells": 40,
      "mean_umi": 32353.3,
      "median_genes": 3447.5,
      "mean_pct_mito": 5.3864
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "cells": 37,
      "mean_umi": 3056.6486,
      "median_genes": 694,
      "mean_pct_mito": 5.1803
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "cells": 30,
      "mean_umi": 15701.2333,
      "median_genes": 3941.5,
      "mean_pct_mito": 6.0102
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "cells": 15,
      "mean_umi": 3743.7333,
      "median_genes": 1234,
      "mean_pct_mito": 5.1509
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "cells": 12,
      "mean_umi": 1385.8333,
      "median_genes": 616.5,
      "mean_pct_mito": 6.9677
    }
  ],
  "program_scores": [
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.605
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.2756
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.1175
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0676
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0555
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0509
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.045
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0435
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0412
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0283
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "B_plasma",
      "genes_used": 7,
      "mean_log1p_score": 0.0163
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.3063
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1504
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0817
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0783
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0503
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0258
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0143
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0093
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0029
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 1.183
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.1984
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0446
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0264
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.023
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0198
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0187
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0163
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0147
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0072
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.8343
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.822
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.6797
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.5692
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.3633
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.3558
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.3292
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0862
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0814
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0488
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Epithelial_tumor",
      "genes_used": 8,
      "mean_log1p_score": 0.0372
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.2392
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0605
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0556
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0321
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0318
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0148
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0147
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0116
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.009
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0072
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0069
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.6326
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.7652
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2132
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1823
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1282
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0703
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0488
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0319
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0318
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0267
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.0154
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0644
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.054
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0503
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0438
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0387
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0299
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0187
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0105
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0099
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0066
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.8101
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.117
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0685
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.043
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0398
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.026
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.015
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0131
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.013
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0037
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    }
  ],
  "program_summary": [
    {
      "program": "Epithelial_tumor",
      "cluster_count": 11,
      "mean_score": 0.3825,
      "max_score": 0.8343,
      "mean_genes_used": 8
    },
    {
      "program": "Myeloid_APC",
      "cluster_count": 11,
      "mean_score": 0.286,
      "max_score": 1.6326,
      "mean_genes_used": 9
    },
    {
      "program": "Endothelial",
      "cluster_count": 11,
      "mean_score": 0.1411,
      "max_score": 1.183,
      "mean_genes_used": 7
    },
    {
      "program": "B_plasma",
      "cluster_count": 11,
      "mean_score": 0.1224,
      "max_score": 0.605,
      "mean_genes_used": 7
    },
    {
      "program": "T_NK_cytotoxic",
      "cluster_count": 11,
      "mean_score": 0.1045,
      "max_score": 0.8101,
      "mean_genes_used": 10
    },
    {
      "program": "Checkpoint_exhaustion",
      "cluster_count": 11,
      "mean_score": 0.0654,
      "max_score": 0.3063,
      "mean_genes_used": 8
    },
    {
      "program": "Fibroblast_stroma",
      "cluster_count": 11,
      "mean_score": 0.0439,
      "max_score": 0.2392,
      "mean_genes_used": 8
    },
    {
      "program": "Proliferation",
      "cluster_count": 11,
      "mean_score": 0.0297,
      "max_score": 0.0644,
      "mean_genes_used": 7
    }
  ],
  "top_markers": [
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 1,
      "gene": "INS",
      "score_log1p_diff": 4.3775,
      "mean_log1p_expr": 5.5027,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 1,
      "gene": "HLA-DRA",
      "score_log1p_diff": 3.9375,
      "mean_log1p_expr": 4.2501,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 1,
      "gene": "CPB1",
      "score_log1p_diff": 3.5832,
      "mean_log1p_expr": 7.8176,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 1,
      "gene": "SPARCL1",
      "score_log1p_diff": 3.2335,
      "mean_log1p_expr": 3.2789,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 1,
      "gene": "NAMPT",
      "score_log1p_diff": 2.9075,
      "mean_log1p_expr": 3.5008,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 1,
      "gene": "ERRFI1",
      "score_log1p_diff": 2.7559,
      "mean_log1p_expr": 3.6923,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 1,
      "gene": "SYTL3",
      "score_log1p_diff": 2.6082,
      "mean_log1p_expr": 2.7759,
      "detect_fraction": 0.9914
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 1,
      "gene": "PRSS1",
      "score_log1p_diff": 2.5234,
      "mean_log1p_expr": 7.5056,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 1,
      "gene": "LCN2",
      "score_log1p_diff": 2.2602,
      "mean_log1p_expr": 2.2969,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 1,
      "gene": "SLC4A4",
      "score_log1p_diff": 2.2244,
      "mean_log1p_expr": 2.5254,
      "detect_fraction": 0.9787
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 1,
      "gene": "PRSS2",
      "score_log1p_diff": 0.8904,
      "mean_log1p_expr": 5.7338,
      "detect_fraction": 0.9821
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 2,
      "gene": "CD74",
      "score_log1p_diff": 3.6617,
      "mean_log1p_expr": 4.1424,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 2,
      "gene": "PNLIP",
      "score_log1p_diff": 3.5746,
      "mean_log1p_expr": 7.8472,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 2,
      "gene": "S100A9",
      "score_log1p_diff": 2.7866,
      "mean_log1p_expr": 2.84,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 2,
      "gene": "PLPP1",
      "score_log1p_diff": 2.7792,
      "mean_log1p_expr": 2.9761,
      "detect_fraction": 0.9643
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 2,
      "gene": "PDK4",
      "score_log1p_diff": 2.676,
      "mean_log1p_expr": 4.0171,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 2,
      "gene": "PTPRC",
      "score_log1p_diff": 2.5772,
      "mean_log1p_expr": 2.7976,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 2,
      "gene": "PRSS2",
      "score_log1p_diff": 2.4962,
      "mean_log1p_expr": 6.8648,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 2,
      "gene": "CFTR",
      "score_log1p_diff": 2.1288,
      "mean_log1p_expr": 2.3819,
      "detect_fraction": 0.9149
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 2,
      "gene": "KRT19",
      "score_log1p_diff": 1.9846,
      "mean_log1p_expr": 2.0706,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 2,
      "gene": "SST",
      "score_log1p_diff": 1.4126,
      "mean_log1p_expr": 1.4852,
      "detect_fraction": 0.4595
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 2,
      "gene": "CELA2A",
      "score_log1p_diff": 0.8328,
      "mean_log1p_expr": 4.6093,
      "detect_fraction": 0.9643
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 3,
      "gene": "PRSS1",
      "score_log1p_diff": 3.5114,
      "mean_log1p_expr": 8.532,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 3,
      "gene": "PLXDC2",
      "score_log1p_diff": 3.4844,
      "mean_log1p_expr": 3.6046,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 3,
      "gene": "FLT1",
      "score_log1p_diff": 2.7013,
      "mean_log1p_expr": 2.7532,
      "detect_fraction": 0.8929
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 3,
      "gene": "MECOM",
      "score_log1p_diff": 2.5618,
      "mean_log1p_expr": 3.112,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 3,
      "gene": "S100A8",
      "score_log1p_diff": 2.5609,
      "mean_log1p_expr": 2.5955,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 3,
      "gene": "IL7R",
      "score_log1p_diff": 2.5249,
      "mean_log1p_expr": 2.588,
      "detect_fraction": 0.9224
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 3,
      "gene": "CELA2A",
      "score_log1p_diff": 2.4883,
      "mean_log1p_expr": 5.7871,
      "detect_fraction": 0.9934
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 3,
      "gene": "PIGR",
      "score_log1p_diff": 1.8987,
      "mean_log1p_expr": 1.9259,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 3,
      "gene": "FXYD2",
      "score_log1p_diff": 1.5916,
      "mean_log1p_expr": 1.9114,
      "detect_fraction": 0.8723
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 3,
      "gene": "PCSK1N",
      "score_log1p_diff": 1.2758,
      "mean_log1p_expr": 1.2985,
      "detect_fraction": 0.9189
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 3,
      "gene": "CELA3A",
      "score_log1p_diff": 0.8232,
      "mean_log1p_expr": 5.3463,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 4,
      "gene": "CELA3B",
      "score_log1p_diff": 3.509,
      "mean_log1p_expr": 7.14,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 4,
      "gene": "SIPA1L1",
      "score_log1p_diff": 3.2297,
      "mean_log1p_expr": 3.677,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 4,
      "gene": "GSN",
      "score_log1p_diff": 2.6188,
      "mean_log1p_expr": 2.7846,
      "detect_fraction": 0.9762
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 4,
      "gene": "NEDD4L",
      "score_log1p_diff": 2.5357,
      "mean_log1p_expr": 3.0709,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 4,
      "gene": "PARP8",
      "score_log1p_diff": 2.4855,
      "mean_log1p_expr": 2.7096,
      "detect_fraction": 0.9828
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 4,
      "gene": "SRGN",
      "score_log1p_diff": 2.4661,
      "mean_log1p_expr": 3.2641,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 4,
      "gene": "PNLIP",
      "score_log1p_diff": 2.4411,
      "mean_log1p_expr": 6.7027,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 4,
      "gene": "ANXA4",
      "score_log1p_diff": 1.4477,
      "mean_log1p_expr": 1.7987,
      "detect_fraction": 0.8936
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 4,
      "gene": "HBB",
      "score_log1p_diff": 1.3637,
      "mean_log1p_expr": 1.3941,
      "detect_fraction": 0.9167
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 4,
      "gene": "TTR",
      "score_log1p_diff": 1.1658,
      "mean_log1p_expr": 1.2149,
      "detect_fraction": 0.8649
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 4,
      "gene": "PRSS1",
      "score_log1p_diff": 0.8058,
      "mean_log1p_expr": 6.2756,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 5,
      "gene": "AMY2A",
      "score_log1p_diff": 3.4905,
      "mean_log1p_expr": 6.3588,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 5,
      "gene": "NAMPT",
      "score_log1p_diff": 3.1719,
      "mean_log1p_expr": 3.6904,
      "detect_fraction": 0.9667
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 5,
      "gene": "TACC1",
      "score_log1p_diff": 2.5715,
      "mean_log1p_expr": 2.8764,
      "detect_fraction": 0.9762
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 5,
      "gene": "MALAT1",
      "score_log1p_diff": 2.469,
      "mean_log1p_expr": 5.2337,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 5,
      "gene": "CUZD1",
      "score_log1p_diff": 2.4601,
      "mean_log1p_expr": 3.8234,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 5,
      "gene": "AMY2A",
      "score_log1p_diff": 2.425,
      "mean_log1p_expr": 5.2735,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 5,
      "gene": "IL1R2",
      "score_log1p_diff": 2.317,
      "mean_log1p_expr": 2.3597,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 5,
      "gene": "BICC1",
      "score_log1p_diff": 1.3421,
      "mean_log1p_expr": 1.4243,
      "detect_fraction": 0.7447
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 5,
      "gene": "S100A6",
      "score_log1p_diff": 1.133,
      "mean_log1p_expr": 1.8144,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 5,
      "gene": "SCG5",
      "score_log1p_diff": 1.0735,
      "mean_log1p_expr": 1.1047,
      "detect_fraction": 0.8919
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 5,
      "gene": "CELA3B",
      "score_log1p_diff": 0.7745,
      "mean_log1p_expr": 4.8569,
      "detect_fraction": 0.9821
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 6,
      "gene": "GP2",
      "score_log1p_diff": 3.4645,
      "mean_log1p_expr": 6.4509,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 6,
      "gene": "HLA-DRB1",
      "score_log1p_diff": 3.1375,
      "mean_log1p_expr": 3.4797,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 6,
      "gene": "A2M",
      "score_log1p_diff": 2.5598,
      "mean_log1p_expr": 2.6969,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 6,
      "gene": "CELA3B",
      "score_log1p_diff": 2.4241,
      "mean_log1p_expr": 6.0381,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 6,
      "gene": "GP2",
      "score_log1p_diff": 2.4104,
      "mean_log1p_expr": 5.7648,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 6,
      "gene": "FYN",
      "score_log1p_diff": 2.3787,
      "mean_log1p_expr": 2.6334,
      "detect_fraction": 0.9914
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 6,
      "gene": "G0S2",
      "score_log1p_diff": 2.1645,
      "mean_log1p_expr": 2.2144,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 6,
      "gene": "PKHD1",
      "score_log1p_diff": 1.2694,
      "mean_log1p_expr": 1.3224,
      "detect_fraction": 0.6809
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 6,
      "gene": "ANXA4",
      "score_log1p_diff": 1.0096,
      "mean_log1p_expr": 1.4418,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 6,
      "gene": "FXYD2",
      "score_log1p_diff": 0.895,
      "mean_log1p_expr": 1.2753,
      "detect_fraction": 0.8919
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 6,
      "gene": "PRSS3",
      "score_log1p_diff": 0.7415,
      "mean_log1p_expr": 3.2719,
      "detect_fraction": 0.9464
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 7,
      "gene": "CLPS",
      "score_log1p_diff": 3.4546,
      "mean_log1p_expr": 8.2697,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 7,
      "gene": "HLA-DRB5",
      "score_log1p_diff": 3.1212,
      "mean_log1p_expr": 3.377,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 7,
      "gene": "EMP1",
      "score_log1p_diff": 2.5028,
      "mean_log1p_expr": 2.5662,
      "detect_fraction": 0.9286
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_1",
      "rank": 7,
      "gene": "CELA3A",
      "score_log1p_diff": 2.4008,
      "mean_log1p_expr": 6.4646,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_7",
      "rank": 7,
      "gene": "SDK1",
      "score_log1p_diff": 2.3957,
      "mean_log1p_expr": 2.8741,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_2",
      "rank": 7,
      "gene": "STAT4",
      "score_log1p_diff": 2.3242,
      "mean_log1p_expr": 2.4111,
      "detect_fraction": 0.9914
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_10",
      "rank": 7,
      "gene": "RNF149",
      "score_log1p_diff": 2.0798,
      "mean_log1p_expr": 2.5164,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_6",
      "rank": 7,
      "gene": "GLIS3",
      "score_log1p_diff": 1.2034,
      "mean_log1p_expr": 1.2795,
      "detect_fraction": 0.6596
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_11",
      "rank": 7,
      "gene": "LYZ",
      "score_log1p_diff": 0.8874,
      "mean_log1p_expr": 1.0921,
      "detect_fraction": 0.8333
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_5",
      "rank": 7,
      "gene": "PLA2G1B",
      "score_log1p_diff": 0.6923,
      "mean_log1p_expr": 4.3882,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_8",
      "rank": 7,
      "gene": "RBP4",
      "score_log1p_diff": 0.6868,
      "mean_log1p_expr": 0.6964,
      "detect_fraction": 0.4865
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_3",
      "rank": 8,
      "gene": "CELA3A",
      "score_log1p_diff": 3.4516,
      "mean_log1p_expr": 7.5356,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_9",
      "rank": 8,
      "gene": "SRGN",
      "score_log1p_diff": 3.1129,
      "mean_log1p_expr": 3.8291,
      "detect_fraction": 1
    },
    {
      "sample_id": "PDAC-046-09-1A",
      "cluster": "cluster_4",
      "rank": 8,
      "gene": "IGFBP7",
      "score_log1p_diff": 2.4885,
      "mean_log1p_expr": 2.7433,
      "detect_fraction": 0.9643
    }
  ],
  "source_tables": {
    "sample_index": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_sample_index.tsv",
    "cluster_qc": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_qc.tsv",
    "program_scores": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_program_scores.tsv",
    "cluster_markers": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_markers.tsv"
  }
}
