{
  "generated_at": "2026-07-09 12:54:49 +0800",
  "dataset_id": "ds-cancerscem-2",
  "dataset_name": "CancerSCEM 2.0",
  "sample_id": "SCE-112-13-1A",
  "donor_id": "SCE-112-13-1A",
  "summary": {
    "sample_id": "SCE-112-13-1A",
    "donor_id": "SCE-112-13-1A",
    "cancer_type": "SCE",
    "health_status": "Spinal Ependymomas; Tumour",
    "tissue_or_cell_source": "Tumour",
    "cells_in_umap_file": 9442,
    "cells_analyzed": 2000,
    "clusters": 17,
    "genes_read": 24857,
    "genes_nonzero_in_analyzed_cells": 22949,
    "mean_umi": 7131,
    "mean_genes": 2266,
    "mean_pct_mito": 2.866,
    "matrix_status": "Matrix available",
    "detail_url": "human-immune-donor-detail.php?dataset_id=ds-cancerscem-2&donor_id=SCE-112-13-1A",
    "umap_href": "IMG/umap/cancerscem-2/donor/SCE-112-13-1A.png",
    "umap_coordinates_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/SCE-112-13-1A.umap.tsv.gz",
    "umap_summary_url": "http://8.142.154.29/LACA/data/human_immune_atlas/cancerscem_2_umap/SCE-112-13-1A.summary.json"
  },
  "visualizations": [
    {
      "title": "Donor-level analysis panel",
      "href": "IMG/human-immune-analysis/cancerscem-deep/donor/SCE-112-13-1A.analysis.png",
      "description": "Cluster cell counts, cluster-by-program score heatmap, and top marker genes."
    }
  ],
  "cluster_qc": [
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "cells": 306,
      "mean_umi": 6875.5817,
      "median_genes": 2357.5,
      "mean_pct_mito": 2.6814
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "cells": 283,
      "mean_umi": 7124.8021,
      "median_genes": 2332,
      "mean_pct_mito": 2.9966
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "cells": 234,
      "mean_umi": 7440.4444,
      "median_genes": 2250,
      "mean_pct_mito": 2.4961
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "cells": 225,
      "mean_umi": 6770.3778,
      "median_genes": 2288,
      "mean_pct_mito": 3.3198
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "cells": 223,
      "mean_umi": 8904.7668,
      "median_genes": 2567,
      "mean_pct_mito": 2.3943
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "cells": 214,
      "mean_umi": 7672.3084,
      "median_genes": 2361,
      "mean_pct_mito": 2.6117
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "cells": 198,
      "mean_umi": 7114.2525,
      "median_genes": 2345.5,
      "mean_pct_mito": 2.8
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "cells": 109,
      "mean_umi": 4460.3394,
      "median_genes": 1709,
      "mean_pct_mito": 4.5546
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "cells": 50,
      "mean_umi": 9899.58,
      "median_genes": 2572.5,
      "mean_pct_mito": 2.8661
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "cells": 44,
      "mean_umi": 7784.6591,
      "median_genes": 2368.5,
      "mean_pct_mito": 1.9008
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "cells": 31,
      "mean_umi": 5492.6774,
      "median_genes": 1927,
      "mean_pct_mito": 2.9437
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "cells": 24,
      "mean_umi": 5612.9583,
      "median_genes": 1732.5,
      "mean_pct_mito": 2.7754
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "cells": 22,
      "mean_umi": 3621.4091,
      "median_genes": 1972.5,
      "mean_pct_mito": 1.8323
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "cells": 19,
      "mean_umi": 2971.3684,
      "median_genes": 961,
      "mean_pct_mito": 3.4106
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "cells": 11,
      "mean_umi": 4579.3636,
      "median_genes": 2482,
      "mean_pct_mito": 5.7162
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "cells": 4,
      "mean_umi": 3921.5,
      "median_genes": 2144,
      "mean_pct_mito": 3.2296
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "cells": 3,
      "mean_umi": 3098.6667,
      "median_genes": 1796,
      "mean_pct_mito": 8.0073
    }
  ],
  "program_scores": [
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.6196
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.6069
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5944
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5942
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5936
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5882
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5837
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5768
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5721
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.5074
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.3194
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.2318
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1888
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1631
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1627
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.1148
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "B_plasma",
      "genes_used": 8,
      "mean_log1p_score": 0.0578
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2773
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2672
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2563
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2498
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2466
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2441
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2204
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.2076
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.197
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1678
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.1324
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0695
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0462
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0433
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0236
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0.0039
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Checkpoint_exhaustion",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.9365
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.1043
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0893
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0876
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0841
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0829
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0782
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.076
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0701
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0683
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0615
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0478
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0301
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.0206
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0.018
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Endothelial",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0122
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0053
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0053
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0048
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0023
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0016
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0015
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0015
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.001
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0.0004
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Epithelial_tumor",
      "genes_used": 6,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.4451
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0834
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.024
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0211
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0201
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0185
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0182
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0182
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0176
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0172
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0152
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0117
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0072
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0.0056
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Fibroblast_stroma",
      "genes_used": 8,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.7016
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.6941
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.6506
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.6196
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.6151
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.5749
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.5485
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.5212
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.5168
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 1.3369
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.4952
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.4727
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2591
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2354
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.2008
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1634
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Myeloid_APC",
      "genes_used": 9,
      "mean_log1p_score": 0.1522
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.2838
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.1186
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0884
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0583
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0539
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0529
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0518
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0481
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0467
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0456
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0447
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0422
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0415
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0396
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0392
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0.0272
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "Proliferation",
      "genes_used": 7,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.7454
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0083
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0063
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0052
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0042
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0041
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0022
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0021
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0017
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0017
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0016
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0.0013
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "program": "T_NK_cytotoxic",
      "genes_used": 10,
      "mean_log1p_score": 0
    }
  ],
  "program_summary": [
    {
      "program": "Myeloid_APC",
      "cluster_count": 17,
      "mean_score": 1.0446,
      "max_score": 1.7016,
      "mean_genes_used": 9
    },
    {
      "program": "B_plasma",
      "cluster_count": 17,
      "mean_score": 0.4162,
      "max_score": 0.6196,
      "mean_genes_used": 8
    },
    {
      "program": "Checkpoint_exhaustion",
      "cluster_count": 17,
      "mean_score": 0.1561,
      "max_score": 0.2773,
      "mean_genes_used": 8
    },
    {
      "program": "Endothelial",
      "cluster_count": 17,
      "mean_score": 0.1091,
      "max_score": 0.9365,
      "mean_genes_used": 7
    },
    {
      "program": "Proliferation",
      "cluster_count": 17,
      "mean_score": 0.0637,
      "max_score": 0.2838,
      "mean_genes_used": 7
    },
    {
      "program": "T_NK_cytotoxic",
      "cluster_count": 17,
      "mean_score": 0.0461,
      "max_score": 0.7454,
      "mean_genes_used": 10
    },
    {
      "program": "Fibroblast_stroma",
      "cluster_count": 17,
      "mean_score": 0.0425,
      "max_score": 0.4451,
      "mean_genes_used": 8
    },
    {
      "program": "Epithelial_tumor",
      "cluster_count": 17,
      "mean_score": 0.0021,
      "max_score": 0.0122,
      "mean_genes_used": 6
    }
  ],
  "top_markers": [
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "rank": 1,
      "gene": "PLP1",
      "score_log1p_diff": 3.3778,
      "mean_log1p_expr": 3.4056,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "rank": 1,
      "gene": "MT2A",
      "score_log1p_diff": 3.1851,
      "mean_log1p_expr": 3.5994,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "rank": 1,
      "gene": "LHFPL3",
      "score_log1p_diff": 2.7928,
      "mean_log1p_expr": 2.8049,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "rank": 1,
      "gene": "DPP10",
      "score_log1p_diff": 2.7291,
      "mean_log1p_expr": 2.8553,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "rank": 1,
      "gene": "HSPA1A",
      "score_log1p_diff": 2.5793,
      "mean_log1p_expr": 2.9387,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "rank": 1,
      "gene": "CCL2",
      "score_log1p_diff": 2.5105,
      "mean_log1p_expr": 4.3085,
      "detect_fraction": 0.9957
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "rank": 1,
      "gene": "VIM",
      "score_log1p_diff": 2.0729,
      "mean_log1p_expr": 2.5353,
      "detect_fraction": 0.8947
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "rank": 1,
      "gene": "CLU",
      "score_log1p_diff": 1.9785,
      "mean_log1p_expr": 2.297,
      "detect_fraction": 0.8716
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "rank": 1,
      "gene": "CD52",
      "score_log1p_diff": 1.8077,
      "mean_log1p_expr": 1.827,
      "detect_fraction": 0.875
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "rank": 1,
      "gene": "IL1B",
      "score_log1p_diff": 1.5298,
      "mean_log1p_expr": 2.6381,
      "detect_fraction": 0.9462
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "rank": 1,
      "gene": "LGALS1",
      "score_log1p_diff": 1.5267,
      "mean_log1p_expr": 2.093,
      "detect_fraction": 0.84
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "rank": 1,
      "gene": "SELENOP",
      "score_log1p_diff": 1.1946,
      "mean_log1p_expr": 1.4821,
      "detect_fraction": 0.8065
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "rank": 1,
      "gene": "RGCC",
      "score_log1p_diff": 1.1639,
      "mean_log1p_expr": 1.9863,
      "detect_fraction": 0.9533
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "rank": 1,
      "gene": "TEX14",
      "score_log1p_diff": 1.0478,
      "mean_log1p_expr": 2.887,
      "detect_fraction": 0.9935
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "rank": 1,
      "gene": "APOC1",
      "score_log1p_diff": 0.6046,
      "mean_log1p_expr": 2.6877,
      "detect_fraction": 0.9798
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "rank": 1,
      "gene": "YWHAH",
      "score_log1p_diff": 0.4559,
      "mean_log1p_expr": 1.9224,
      "detect_fraction": 0.947
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "rank": 1,
      "gene": "AIF1",
      "score_log1p_diff": 0.4459,
      "mean_log1p_expr": 2.3789,
      "detect_fraction": 0.9867
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "rank": 2,
      "gene": "CRYAB",
      "score_log1p_diff": 2.8895,
      "mean_log1p_expr": 3.0341,
      "detect_fraction": 0.9545
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "rank": 2,
      "gene": "EMP1",
      "score_log1p_diff": 2.7919,
      "mean_log1p_expr": 2.9592,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "rank": 2,
      "gene": "PTPRZ1",
      "score_log1p_diff": 2.4962,
      "mean_log1p_expr": 2.5407,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "rank": 2,
      "gene": "HSPA1B",
      "score_log1p_diff": 2.4166,
      "mean_log1p_expr": 2.5933,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "rank": 2,
      "gene": "CFAP299",
      "score_log1p_diff": 2.3766,
      "mean_log1p_expr": 2.3796,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "rank": 2,
      "gene": "IGFBP7",
      "score_log1p_diff": 1.914,
      "mean_log1p_expr": 1.9697,
      "detect_fraction": 0.8421
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "rank": 2,
      "gene": "CCL4L2",
      "score_log1p_diff": 1.8831,
      "mean_log1p_expr": 5.3781,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "rank": 2,
      "gene": "LSAMP",
      "score_log1p_diff": 1.7942,
      "mean_log1p_expr": 1.8625,
      "detect_fraction": 0.9174
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "rank": 2,
      "gene": "IL32",
      "score_log1p_diff": 1.595,
      "mean_log1p_expr": 1.6012,
      "detect_fraction": 0.8333
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "rank": 2,
      "gene": "CCL3L1",
      "score_log1p_diff": 1.4642,
      "mean_log1p_expr": 4.5948,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "rank": 2,
      "gene": "VIM",
      "score_log1p_diff": 1.3053,
      "mean_log1p_expr": 1.7548,
      "detect_fraction": 0.82
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "rank": 2,
      "gene": "SPP1",
      "score_log1p_diff": 1.1348,
      "mean_log1p_expr": 3.0829,
      "detect_fraction": 0.9393
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "rank": 2,
      "gene": "RNASE1",
      "score_log1p_diff": 1.0143,
      "mean_log1p_expr": 1.1501,
      "detect_fraction": 0.5806
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "rank": 2,
      "gene": "CCDC200",
      "score_log1p_diff": 0.6751,
      "mean_log1p_expr": 1.237,
      "detect_fraction": 0.7712
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "rank": 2,
      "gene": "FTL",
      "score_log1p_diff": 0.5607,
      "mean_log1p_expr": 4.559,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "rank": 2,
      "gene": "C1QB",
      "score_log1p_diff": 0.4348,
      "mean_log1p_expr": 3.2504,
      "detect_fraction": 0.9911
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "rank": 2,
      "gene": "CX3CR1",
      "score_log1p_diff": 0.41,
      "mean_log1p_expr": 1.3508,
      "detect_fraction": 0.9117
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "rank": 3,
      "gene": "CLDN5",
      "score_log1p_diff": 2.6618,
      "mean_log1p_expr": 2.6663,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "rank": 3,
      "gene": "TUBA1A",
      "score_log1p_diff": 2.5584,
      "mean_log1p_expr": 3.1856,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "rank": 3,
      "gene": "KCNIP4",
      "score_log1p_diff": 2.4354,
      "mean_log1p_expr": 2.4466,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "rank": 3,
      "gene": "DNAH9",
      "score_log1p_diff": 2.2836,
      "mean_log1p_expr": 2.289,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "rank": 3,
      "gene": "DPP10",
      "score_log1p_diff": 1.7909,
      "mean_log1p_expr": 1.8237,
      "detect_fraction": 0.8073
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "rank": 3,
      "gene": "CCL4",
      "score_log1p_diff": 1.7128,
      "mean_log1p_expr": 4.7377,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "rank": 3,
      "gene": "ADIRF",
      "score_log1p_diff": 1.7105,
      "mean_log1p_expr": 1.8083,
      "detect_fraction": 0.8421
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "rank": 3,
      "gene": "HSPB1",
      "score_log1p_diff": 1.4932,
      "mean_log1p_expr": 2.4294,
      "detect_fraction": 0.9318
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "rank": 3,
      "gene": "CCL5",
      "score_log1p_diff": 1.4666,
      "mean_log1p_expr": 1.7429,
      "detect_fraction": 0.7083
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "rank": 3,
      "gene": "CCL4L2",
      "score_log1p_diff": 1.2175,
      "mean_log1p_expr": 4.797,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "rank": 3,
      "gene": "S100A6",
      "score_log1p_diff": 1.1343,
      "mean_log1p_expr": 1.5045,
      "detect_fraction": 0.76
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "rank": 3,
      "gene": "CCL2",
      "score_log1p_diff": 1.0133,
      "mean_log1p_expr": 3.0893,
      "detect_fraction": 0.9677
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "rank": 3,
      "gene": "CCL4",
      "score_log1p_diff": 0.8254,
      "mean_log1p_expr": 3.9625,
      "detect_fraction": 0.9953
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "rank": 3,
      "gene": "AC022217.3",
      "score_log1p_diff": 0.6393,
      "mean_log1p_expr": 1.907,
      "detect_fraction": 0.9739
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "rank": 3,
      "gene": "FOS",
      "score_log1p_diff": 0.5178,
      "mean_log1p_expr": 3.3903,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "rank": 3,
      "gene": "RPL26",
      "score_log1p_diff": 0.4279,
      "mean_log1p_expr": 3.225,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "rank": 3,
      "gene": "SYNDIG1",
      "score_log1p_diff": 0.3941,
      "mean_log1p_expr": 1.424,
      "detect_fraction": 0.8905
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "rank": 4,
      "gene": "PTPRG",
      "score_log1p_diff": 2.4164,
      "mean_log1p_expr": 2.4484,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "rank": 4,
      "gene": "OPCML",
      "score_log1p_diff": 2.3748,
      "mean_log1p_expr": 2.3914,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "rank": 4,
      "gene": "PTGDS",
      "score_log1p_diff": 2.3377,
      "mean_log1p_expr": 2.5977,
      "detect_fraction": 0.9545
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "rank": 4,
      "gene": "SYNE1",
      "score_log1p_diff": 2.2084,
      "mean_log1p_expr": 2.289,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "rank": 4,
      "gene": "LINC01088",
      "score_log1p_diff": 1.7857,
      "mean_log1p_expr": 1.8248,
      "detect_fraction": 0.9541
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "rank": 4,
      "gene": "CCL3L1",
      "score_log1p_diff": 1.6548,
      "mean_log1p_expr": 4.755,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "rank": 4,
      "gene": "S100A4",
      "score_log1p_diff": 1.4449,
      "mean_log1p_expr": 1.8623,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "rank": 4,
      "gene": "TAGLN",
      "score_log1p_diff": 1.4421,
      "mean_log1p_expr": 1.458,
      "detect_fraction": 0.4737
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "rank": 4,
      "gene": "DNAJB1",
      "score_log1p_diff": 1.4291,
      "mean_log1p_expr": 1.5944,
      "detect_fraction": 0.8182
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "rank": 4,
      "gene": "AC243829.1",
      "score_log1p_diff": 1.1948,
      "mean_log1p_expr": 1.723,
      "detect_fraction": 0.8789
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "rank": 4,
      "gene": "FTL",
      "score_log1p_diff": 1.1206,
      "mean_log1p_expr": 5.1464,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "rank": 4,
      "gene": "CCL8",
      "score_log1p_diff": 0.9615,
      "mean_log1p_expr": 1.1229,
      "detect_fraction": 0.5161
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_6",
      "rank": 4,
      "gene": "CCL3",
      "score_log1p_diff": 0.7624,
      "mean_log1p_expr": 4.221,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_1",
      "rank": 4,
      "gene": "FOS",
      "score_log1p_diff": 0.6197,
      "mean_log1p_expr": 3.4487,
      "detect_fraction": 0.9935
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_7",
      "rank": 4,
      "gene": "RGS1",
      "score_log1p_diff": 0.5077,
      "mean_log1p_expr": 2.3277,
      "detect_fraction": 0.9596
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_4",
      "rank": 4,
      "gene": "TUBA1B",
      "score_log1p_diff": 0.4231,
      "mean_log1p_expr": 2.4831,
      "detect_fraction": 0.9778
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_2",
      "rank": 4,
      "gene": "C1QB",
      "score_log1p_diff": 0.3907,
      "mean_log1p_expr": 3.1999,
      "detect_fraction": 0.9859
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_16",
      "rank": 5,
      "gene": "ID1",
      "score_log1p_diff": 2.3385,
      "mean_log1p_expr": 2.4089,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_15",
      "rank": 5,
      "gene": "CSMD1",
      "score_log1p_diff": 2.2826,
      "mean_log1p_expr": 2.2925,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_13",
      "rank": 5,
      "gene": "GPM6B",
      "score_log1p_diff": 2.1698,
      "mean_log1p_expr": 2.3289,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_17",
      "rank": 5,
      "gene": "NRG3",
      "score_log1p_diff": 2.0717,
      "mean_log1p_expr": 2.1538,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_8",
      "rank": 5,
      "gene": "CTNNA2",
      "score_log1p_diff": 1.5696,
      "mean_log1p_expr": 1.6028,
      "detect_fraction": 0.8532
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_3",
      "rank": 5,
      "gene": "CCL3",
      "score_log1p_diff": 1.4541,
      "mean_log1p_expr": 4.8241,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_10",
      "rank": 5,
      "gene": "HSP90AA1",
      "score_log1p_diff": 1.4259,
      "mean_log1p_expr": 2.7553,
      "detect_fraction": 0.9773
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_14",
      "rank": 5,
      "gene": "S100A6",
      "score_log1p_diff": 1.3686,
      "mean_log1p_expr": 1.7541,
      "detect_fraction": 0.8421
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_12",
      "rank": 5,
      "gene": "SKAP1",
      "score_log1p_diff": 1.2732,
      "mean_log1p_expr": 1.2742,
      "detect_fraction": 0.8333
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_5",
      "rank": 5,
      "gene": "CCL3",
      "score_log1p_diff": 1.1691,
      "mean_log1p_expr": 4.579,
      "detect_fraction": 1
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_9",
      "rank": 5,
      "gene": "S100A4",
      "score_log1p_diff": 1.0856,
      "mean_log1p_expr": 1.4933,
      "detect_fraction": 0.88
    },
    {
      "sample_id": "SCE-112-13-1A",
      "cluster": "cluster_11",
      "rank": 5,
      "gene": "LYVE1",
      "score_log1p_diff": 0.912,
      "mean_log1p_expr": 0.9413,
      "detect_fraction": 0.7419
    }
  ],
  "source_tables": {
    "sample_index": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_sample_index.tsv",
    "cluster_qc": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_qc.tsv",
    "program_scores": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_program_scores.tsv",
    "cluster_markers": "data/human_immune_atlas/analysis/cancerscem_deep/cancerscem_cluster_markers.tsv"
  }
}
