CancerSCEM Deep Analysis

Matrix-backed analysis for CancerSCEM 2.0 Chinese-subset donors with donor UMAP, sampled expression matrix summaries, cluster marker genes, and fixed gene-program scores.

Analysis hub CancerSCEM donor list Sample index TSV Manifest JSON

173 Matrix-backed donors

338,423 Cells sampled for analysis

2,944 Donor-level clusters

8 Gene programs scored

Analysis Method

Generated 2026-07-09 11:31:31 +0800; matrix extraction finished 2026-07-09 11:18:31 +0800.

28 cancer types

CellsUp to 2000 cells per donor, stratified by existing donor UMAP clusters.

QCUMI totals, detected genes, and mitochondrial fraction summarized per donor and cluster.

MarkersCluster genes ranked by mean log1p cluster-vs-rest expression difference.

ProgramsEight fixed immune, tumor, stromal, proliferation, and checkpoint gene programs.

Visual Summary

Static PNG figures generated from the aggregated TSV outputs.

Per-donor QC profile

Cancer Type Summary

Donor coverage, sampled cells, cluster complexity, and median QC by cancer type.

Cancer Type	Donors	Cells Analyzed	Median Clusters	Median Genes	Median UMI	Mean Mito %
ESCC	41	81,142	18	1960	6875	3.4
PDAC	33	62,896	17	1634	4517	4.768
LUSC	9	17,998	17	1881	6449	2.71
HCC	9	16,612	19	1402	5608	6.235
PTC	7	13,997	16	2786	8098	3.937
AM	7	13,867	14	2557	8047	4.468
BRCA	6	11,718	17	2094	6600	4.126
NB	5	10,000	17	2091	6482	3.241
HSCC	5	9,996	19	1601	5362	6.749
CM	4	7,999	16	2117	5526	4.134
GBC	4	7,999	18.5	1554	4822	2.549
iCCA	4	7,998	18	1778	6237	2.332
OSCC	4	7,997	18.5	1906	6377	3.767
SACC	4	7,994	19.5	2269	7326	3.717
GC	3	5,999	27	1454	4420	3.478
NSCLC	3	5,999	15	1590	4513	4.238
SCE	3	5,999	16	2456	7131	3.24
SKCM	3	5,998	20	1877	5383	3.059
dCCA	3	5,998	19	1579	4610	2.97
CRC	3	5,994	15	2005	8122	3.898
HNSCC	3	5,119	23	1778	5126	3.198
MPLC	2	4,000	18.5	2303	6175	2.927
PAAD	2	3,999	15.5	1342	5406	5.124
HGSOC	2	3,895	17.5	2427	6038	4.643
CaCx	1	2,000	10	1042
SCCIS	1	1,999	10	2234
TNBC	1	1,744	13	1394	5299	2.544
STAD	1	1,467	13	2152	9763	6.231

Gene Program Scores

Mean log1p expression score by cancer type and predefined program.

Cancer Type	Program	Donors	Clusters	Mean Score	Genes Used
AM	Fibroblast_stroma	7	101	0.2219	7.208
AM	B_plasma	7	101	0.193	7.208
AM	Proliferation	7	101	0.1904	6.505
AM	T_NK_cytotoxic	7	101	0.1381	9.109
AM	Endothelial	7	101	0.1115	6.307
AM	Myeloid_APC	7	101	0.1028	8.505
AM	Checkpoint_exhaustion	7	101	0.06552	7.208
AM	Epithelial_tumor	7	101	0.03599	7.05
BRCA	Fibroblast_stroma	6	101	0.4459	7.069
BRCA	B_plasma	6	101	0.3861	7.802
BRCA	T_NK_cytotoxic	6	101	0.3138	9.901
BRCA	Myeloid_APC	6	101	0.2525	9
BRCA	Epithelial_tumor	6	101	0.1296	7.178
BRCA	Endothelial	6	101	0.1244	6.287
BRCA	Checkpoint_exhaustion	6	101	0.06989	8
BRCA	Proliferation	6	101	0.06335	6.604
CM	B_plasma	4	63	0.2259	8
CM	T_NK_cytotoxic	4	63	0.1789	10
CM	Proliferation	4	63	0.1754	7
CM	Fibroblast_stroma	4	63	0.1638	8
CM	Myeloid_APC	4	63	0.1039	9
CM	Checkpoint_exhaustion	4	63	0.1011	8
CM	Endothelial	4	63	0.1008	7
CM	Epithelial_tumor	4	63	0.025	7.508
CRC	B_plasma	3	49	0.7049	8
CRC	T_NK_cytotoxic	3	49	0.2741	10
CRC	Myeloid_APC	3	49	0.2718	9
CRC	Checkpoint_exhaustion	3	49	0.1967	8
CRC	Epithelial_tumor	3	49	0.1045	7.082
CRC	Fibroblast_stroma	3	49	0.0911	8
CRC	Proliferation	3	49	0.06311	7
CRC	Endothelial	3	49	0.04312	7
CaCx	Myeloid_APC	1	10	0.5105	9
CaCx	T_NK_cytotoxic	1	10	0.3853	9
CaCx	B_plasma	1	10	0.2805	6
CaCx	Checkpoint_exhaustion	1	10	0.1901	8
CaCx	Epithelial_tumor	1	10	0.07311	6
CaCx	Proliferation	1	10	0.06389	3
CaCx	Fibroblast_stroma	1	10	0.02117	7
CaCx	Endothelial	1	10	0.02075	4
ESCC	B_plasma	41	711	0.4914	7.648
ESCC	T_NK_cytotoxic	41	711	0.3527	9.536
ESCC	Myeloid_APC	41	711	0.2966	8.761
ESCC	Fibroblast_stroma	41	711	0.2231	7.634
ESCC	Checkpoint_exhaustion	41	711	0.1771	7.705
ESCC	Epithelial_tumor	41	711	0.1744	7.62
ESCC	Proliferation	41	711	0.1588	6.705
ESCC	Endothelial	41	711	0.1338	6.588
GBC	T_NK_cytotoxic	4	73	0.619	10
GBC	B_plasma	4	73	0.5842	8
GBC	Myeloid_APC	4	73	0.3208	9
GBC	Checkpoint_exhaustion	4	73	0.1111	8
GBC	Proliferation	4	73	0.1042	7
GBC	Fibroblast_stroma	4	73	0.07798	5.342
GBC	Epithelial_tumor	4	73	0.04036	6.603
GBC	Endothelial	4	73	0.03568	6.301
GC	T_NK_cytotoxic	3	71	0.7951	9.577
GC	Myeloid_APC	3	71	0.4651	9
GC	B_plasma	3	71	0.3722	7.577
GC	Checkpoint_exhaustion	3	71	0.07658	8
GC	Endothelial	3	71	0.05816	4.718
GC	Proliferation	3	71	0.04809	6.437
GC	Fibroblast_stroma	3	71	0.01502	3
GC	Epithelial_tumor	3	71	0.001379	6.099
HCC	B_plasma	9	155	0.7327	7.871
HCC	Myeloid_APC	9	155	0.6424	9
HCC	T_NK_cytotoxic	9	155	0.301	9.935
HCC	Proliferation	9	155	0.1813	6.742
HCC	Endothelial	9	155	0.1788	6.806
HCC	Checkpoint_exhaustion	9	155	0.09271	8
HCC	Epithelial_tumor	9	155	0.0908	6.155
HCC	Fibroblast_stroma	9	155	0.08202	7.413
HGSOC	Myeloid_APC	2	35	0.2895	9
HGSOC	T_NK_cytotoxic	2	35	0.219	10
HGSOC	B_plasma	2	35	0.1958	8
HGSOC	Epithelial_tumor	2	35	0.1774	8
HGSOC	Checkpoint_exhaustion	2	35	0.1473	8
HGSOC	Proliferation	2	35	0.08898	7
HGSOC	Fibroblast_stroma	2	35	0.07308	8
HGSOC	Endothelial	2	35	0.06672	6
HNSCC	Myeloid_APC	3	70	0.3612	9
HNSCC	Fibroblast_stroma	3	70	0.2879	8
HNSCC	T_NK_cytotoxic	3	70	0.2362	10
HNSCC	Epithelial_tumor	3	70	0.2105	7.586
HNSCC	B_plasma	3	70	0.2038	7.586
HNSCC	Checkpoint_exhaustion	3	70	0.1296	8
HNSCC	Proliferation	3	70	0.11	7
HNSCC	Endothelial	3	70	0.08788	7
HSCC	B_plasma	5	87	0.9124	8
HSCC	Myeloid_APC	5	87	0.532	9
HSCC	Proliferation	5	87	0.1962	7
HSCC	T_NK_cytotoxic	5	87	0.1942	10
HSCC	Fibroblast_stroma	5	87	0.1829	8
HSCC	Epithelial_tumor	5	87	0.1522	8
HSCC	Endothelial	5	87	0.1137	7
HSCC	Checkpoint_exhaustion	5	87	0.08702	8
LUSC	B_plasma	9	149	0.4275	7.799
LUSC	Myeloid_APC	9	149	0.3666	9
LUSC	T_NK_cytotoxic	9	149	0.3469	9.799
LUSC	Checkpoint_exhaustion	9	149	0.1665	8
LUSC	Epithelial_tumor	9	149	0.1266	7.866
LUSC	Proliferation	9	149	0.06008	6.732
LUSC	Endothelial	9	149	0.05406	6.711
LUSC	Fibroblast_stroma	9	149	0.05047	7.933
MPLC	B_plasma	2	37	0.4365	8
MPLC	T_NK_cytotoxic	2	37	0.3031	10
MPLC	Myeloid_APC	2	37	0.2638	9
MPLC	Epithelial_tumor	2	37	0.1747	8
MPLC	Checkpoint_exhaustion	2	37	0.157	8
MPLC	Proliferation	2	37	0.08542	7
MPLC	Fibroblast_stroma	2	37	0.04669	8
MPLC	Endothelial	2	37	0.03576	7
NB	B_plasma	5	76	0.2533	6.974
NB	Proliferation	5	76	0.2442	6.342
NB	Myeloid_APC	5	76	0.2393	8.474
NB	T_NK_cytotoxic	5	76	0.193	8.947
NB	Epithelial_tumor	5	76	0.05482	6.329
NB	Checkpoint_exhaustion	5	76	0.05092	7.342
NB	Endothelial	5	76	0.03554	5.684
NB	Fibroblast_stroma	5	76	0.03266	5.605
NSCLC	Epithelial_tumor	3	50	0.5026	7
NSCLC	Myeloid_APC	3	50	0.4847	9
NSCLC	B_plasma	3	50	0.3543	8
NSCLC	Fibroblast_stroma	3	50	0.1959	8
NSCLC	Proliferation	3	50	0.1751	7
NSCLC	T_NK_cytotoxic	3	50	0.09832	10
NSCLC	Endothelial	3	50	0.06352	7
NSCLC	Checkpoint_exhaustion	3	50	0.03916	8
OSCC	Myeloid_APC	4	69	0.4903	8.42
OSCC	B_plasma	4	69	0.4289	7.42
OSCC	Fibroblast_stroma	4	69	0.3002	7.13
OSCC	T_NK_cytotoxic	4	69	0.2158	8.986
OSCC	Epithelial_tumor	4	69	0.2066	7.275
OSCC	Checkpoint_exhaustion	4	69	0.1337	7.42
OSCC	Proliferation	4	69	0.1137	6.275
OSCC	Endothelial	4	69	0.04423	6.13
PAAD	B_plasma	2	31	0.4516	6.71
PAAD	Fibroblast_stroma	2	31	0.3236	6.387
PAAD	Myeloid_APC	2	31	0.3005	8.355
PAAD	T_NK_cytotoxic	2	31	0.2754	7.742
PAAD	Proliferation	2	31	0.1076	5.387
PAAD	Epithelial_tumor	2	31	0.08956	6.387
PAAD	Checkpoint_exhaustion	2	31	0.08857	6.71
PAAD	Endothelial	2	31	0.08321	5.065
PDAC	B_plasma	33	548	0.323	7.714
PDAC	Fibroblast_stroma	33	548	0.3092	7.982
PDAC	Epithelial_tumor	33	548	0.2733	7.852
PDAC	Myeloid_APC	33	548	0.2441	8.945
PDAC	Endothelial	33	548	0.1629	6.909
PDAC	T_NK_cytotoxic	33	548	0.1356	9.909
PDAC	Proliferation	33	548	0.06853	6.728
PDAC	Checkpoint_exhaustion	33	548	0.05957	7.726
PTC	B_plasma	7	117	0.3529	7.88
PTC	Fibroblast_stroma	7	117	0.2291	8
PTC	T_NK_cytotoxic	7	117	0.2168	10
PTC	Epithelial_tumor	7	117	0.2118	6.991
PTC	Myeloid_APC	7	117	0.1934	9
PTC	Endothelial	7	117	0.184	7
PTC	Checkpoint_exhaustion	7	117	0.1538	8
PTC	Proliferation	7	117	0.06622	7
SACC	Epithelial_tumor	4	80	0.6097	8
SACC	Fibroblast_stroma	4	80	0.2697	8
SACC	Myeloid_APC	4	80	0.265	9
SACC	B_plasma	4	80	0.1764	7.737
SACC	Endothelial	4	80	0.1347	7
SACC	T_NK_cytotoxic	4	80	0.09077	10
SACC	Proliferation	4	80	0.08737	7
SACC	Checkpoint_exhaustion	4	80	0.04665	8
SCCIS	Fibroblast_stroma	1	10	0.6796	8
SCCIS	Epithelial_tumor	1	10	0.4942	8
SCCIS	Myeloid_APC	1	10	0.3212	9
SCCIS	Endothelial	1	10	0.1668	6
SCCIS	B_plasma	1	10	0.0757	8
SCCIS	Proliferation	1	10	0.07544	7
SCCIS	Checkpoint_exhaustion	1	10	0.03121	8
SCCIS	T_NK_cytotoxic	1	10	0.02723	10
SCE	Myeloid_APC	3	45	0.7629	9
SCE	B_plasma	3	45	0.3847	8
SCE	Checkpoint_exhaustion	3	45	0.1215	8
SCE	Endothelial	3	45	0.1081	7
SCE	Fibroblast_stroma	3	45	0.1054	8
SCE	T_NK_cytotoxic	3	45	0.1014	10
SCE	Proliferation	3	45	0.07342	7
SCE	Epithelial_tumor	3	45	0.02068	6
SKCM	B_plasma	3	57	0.5273	8
SKCM	Myeloid_APC	3	57	0.3872	9
SKCM	T_NK_cytotoxic	3	57	0.3369	10
SKCM	Checkpoint_exhaustion	3	57	0.1806	8
SKCM	Proliferation	3	57	0.08985	7
SKCM	Fibroblast_stroma	3	57	0.07071	8
SKCM	Endothelial	3	57	0.03667	7
SKCM	Epithelial_tumor	3	57	0.01119	8
STAD	Epithelial_tumor	1	13	1.483	7
STAD	Myeloid_APC	1	13	0.4371	6
STAD	Proliferation	1	13	0.1842	7
STAD	B_plasma	1	13	0.1526	6
STAD	T_NK_cytotoxic	1	13	0.02709	10
STAD	Checkpoint_exhaustion	1	13	0.01093	8
STAD	Fibroblast_stroma	1	13	0.008648	6
STAD	Endothelial	1	13	0.008245	6
TNBC	Epithelial_tumor	1	13	0.4719	8
TNBC	Myeloid_APC	1	13	0.3479	9
TNBC	B_plasma	1	13	0.3331	7
TNBC	Proliferation	1	13	0.2084	7
TNBC	Fibroblast_stroma	1	13	0.05887	8
TNBC	T_NK_cytotoxic	1	13	0.05817	10
TNBC	Checkpoint_exhaustion	1	13	0.03215	8
TNBC	Endothelial	1	13	0.0258	6
dCCA	B_plasma	3	56	0.5057	8
dCCA	T_NK_cytotoxic	3	56	0.4144	10
dCCA	Myeloid_APC	3	56	0.3006	9
dCCA	Epithelial_tumor	3	56	0.1752	6.5
dCCA	Proliferation	3	56	0.09299	7
dCCA	Checkpoint_exhaustion	3	56	0.0623	8
dCCA	Endothelial	3	56	0.04292	5.964
dCCA	Fibroblast_stroma	3	56	0.03645	6.125
iCCA	B_plasma	4	67	0.4015	7.701
iCCA	T_NK_cytotoxic	4	67	0.3854	9.851
iCCA	Myeloid_APC	4	67	0.3573	9
iCCA	Fibroblast_stroma	4	67	0.2957	6.328
iCCA	Epithelial_tumor	4	67	0.1839	6.433
iCCA	Proliferation	4	67	0.1467	6.403
iCCA	Endothelial	4	67	0.1036	6.045
iCCA	Checkpoint_exhaustion	4	67	0.07538	8

Recurrent Cluster Markers

Top recurrent genes among top-3 marker calls per donor cluster.

1,060 genes

Gene	Top-3 Hits	Donors	Cancer Types	Mean Score	Mean Detect Fraction
HLA-DRA	308	152	24	2.517	0.9695
CD74	284	150	26	2.496	0.9881
CCL5	280	136	25	1.864	0.9267
NKG7	209	110	22	1.923	0.952
IGFBP7	195	109	23	2.642	0.9542
GNLY	167	105	23	2.273	0.8584
IGKC	139	114	26	3.66	0.8272
IL32	125	89	22	1.563	0.9425
S100A8	101	67	17	2.778	0.9473
S100A9	101	73	21	2.741	0.9482
IL7R	98	74	21	1.267	0.8523
TPSB2	95	93	21	3.332	0.9558
TPSAB1	89	87	18	3.242	0.9728
CXCL8	88	64	17	2.423	0.9325
CPA3	85	84	17	2.814	0.9608
JCHAIN	82	74	20	3.51	0.8456
LYZ	80	64	23	2.388	0.9148
IGHG1	76	67	17	3.896	0.8576
COL1A1	71	64	17	3.253	0.9429
DCN	71	50	11	2.991	0.9667
GZMB	70	56	16	2.272	0.9441
MGP	68	55	16	2.744	0.9431
FTL	66	56	18	2.612	0.9975
COL1A2	65	57	15	3.034	0.9354
CCL4	65	54	20	1.659	0.8474
IFI27	58	44	14	1.905	0.958
STMN1	57	56	16	2.129	0.941
COL3A1	55	46	17	2.949	0.9255
S100A2	55	39	10	2.75	0.9452
S100A6	55	38	15	1.882	0.9685
CXCR4	52	42	13	1.186	0.8948
TAGLN	50	49	15	2.778	0.958
CST3	49	35	16	2.788	0.9403
IFI30	49	44	10	2.723	0.9504
LTB	49	31	17	1.236	0.8771
RGS5	47	43	7	2.55	0.9105
G0S2	47	40	11	1.896	0.9034
NAMPT	47	30	11	1.794	0.9907
KRT14	46	31	10	2.849	0.9483
SPARC	46	37	13	2.573	0.9301
HLA-DRB1	45	36	15	2.434	0.9632
TUBA1B	45	43	16	2.06	0.9627
KRT17	44	31	7	2.933	0.9485
SPARCL1	42	35	12	2.211	0.943
IL1B	41	37	9	2.649	0.8664
KRT19	41	32	8	2.209	0.9412
PTPRC	40	28	13	1.301	0.9173
FXYD2	39	23	3	1.888	0.9666
SRGN	39	29	11	1.461	0.9489
PLVAP	38	34	6	2.052	0.935
HMGB2	38	34	12	1.965	0.9385
SPP1	37	28	13	2.711	0.896
TYROBP	37	35	11	2.114	0.9314
GZMK	36	33	16	1.237	0.7917
CXCL13	35	29	11	1.796	0.7842
CD52	35	27	9	1.163	0.8629
APOE	34	28	13	2.355	0.9129
S100A4	34	32	11	1.352	0.9047
CD3E	34	27	6	1.043	0.9379
FABP5	33	22	5	2.287	0.9648
MALAT1	32	17	7	1.562	0.9977
IGHG3	31	31	14	4.011	0.8914
ADIRF	31	27	7	2.114	0.9481
MT2A	31	25	12	2.043	0.9655
MS4A1	31	28	9	1.717	0.9504
IGHG4	30	25	12	3.67	0.8933
HLA-DPB1	30	26	15	2.262	0.9524
CD79A	30	24	8	1.777	0.9511
BATF	30	29	10	1.537	0.9148
CLU	29	25	8	2.081	0.939
CD7	29	22	5	1.726	0.9407
IGHA1	28	23	12	3.51	0.8434
ACKR1	28	28	5	2.248	0.8889
SLC4A4	28	13	1	1.772	0.9808
LUM	27	24	8	2.72	0.9139
TMSB4X	27	11	5	1.919	0.969
RPS27	26	15	10	1.904	0.9836
TNFRSF4	26	25	4	1.579	0.8291
INS	25	21	1	4.012	0.9493
BANK1	25	23	11	2.353	0.9672

Top Markers by Cancer Type

Representative high-frequency marker genes for each cancer type.

Cancer Type	Gene	Top-3 Hits	Donors	Mean Score	Detect Fraction
AM	TMSB4X	15	5	1.606	0.9559
AM	HLA-DRA	10	6	2.343	0.9529
AM	CD74	10	6	2.333	0.9637
AM	IGFBP7	9	4	3.175	0.983
AM	PMEL	9	4	1.551	0.9885
AM	CCL5	8	3	1.323	0.8807
AM	COL1A1	6	6	3.711	0.9923
AM	S100B	5	2	1.545	0.9904
AM	S100A6	5	3	1.242	0.9993
AM	SRGN	5	3	1.111	0.9097
AM	JUN	5	4	1.037	0.996
AM	COL1A2	4	4	3.371	0.9962
BRCA	CD74	16	6	2.993	0.9887
BRCA	DCN	15	4	2.481	0.9948
BRCA	HLA-DRA	13	6	2.991	0.9612
BRCA	NKG7	11	5	2.37	0.9955
BRCA	CCL5	10	5	1.939	0.9475
BRCA	GNLY	8	5	2.537	0.9054
BRCA	IL7R	8	4	1.552	0.933
BRCA	MGP	6	4	3.632	0.9849
BRCA	CFD	6	3	3.099	0.9731
BRCA	APOD	6	3	2.406	0.9907
BRCA	IL32	6	4	1.592	0.9777
BRCA	LTB	6	2	1.07	0.8945
CM	CD74	7	4	2.237	0.9313
CM	HLA-DRA	6	4	2.448	0.8916
CM	PMEL	6	2	1.262	0.9849
CM	TMSB4X	5	2	2.262	0.9773
CM	S100A6	5	4	2.187	0.9958
CM	TYRP1	5	2	1.237	0.9651
CM	NKG7	5	2	1.162	0.8928
CM	IGFBP7	4	2	2.821	0.9824
CM	VIM	4	3	2.035	0.9941
CM	CXCL13	4	2	1.136	0.663
CM	COL3A1	3	2	3.061	0.9667
CM	LDB2	3	3	2.444	0.9874
CRC	HLA-DRA	9	3	2.838	0.9338
CRC	JCHAIN	7	2	3.972	0.9283
CRC	IGKC	6	3	4.13	0.9773
CRC	IGHA1	6	2	3.257	0.9155
CRC	CCL5	6	3	2.362	0.9407
CRC	CXCL8	5	3	1.69	0.9476
CRC	FYN	4	2	1.54	0.966
CRC	NAMPT	4	2	1.493	0.9959
CRC	FTL	3	2	2.994	0.9844
CRC	CD74	3	3	2.915	1
CRC	RPS27	3	1	2.364	0.97
CRC	HLA-DPB1	3	2	1.83	0.9203
CaCx	RPS27	2	1	2.258	0.9923
CaCx	RPL41	2	1	2.048	0.9966
CaCx	NAMPT	2	1	1.364	0.9856
CaCx	RPLP1	2	1	1.217	0.9786
CaCx	RABGAP1L	2	1	0.3562	0.8176
CaCx	S100A8	1	1	3.422	1
CaCx	S100A9	1	1	3.378	1
CaCx	LYZ	1	1	2.901	0.9945
CaCx	CTSB	1	1	2.778	1
CaCx	FN1	1	1	2.568	0.9835
CaCx	RPS12	1	1	2.181	0.9862
CaCx	CALML5	1	1	2.163	0.9355
ESCC	CCL5	84	36	2.046	0.9332
ESCC	CD74	76	36	2.649	0.9955
ESCC	HLA-DRA	72	35	2.533	0.9757
ESCC	IGFBP7	71	33	2.892	0.9702
ESCC	NKG7	62	36	1.859	0.9369
ESCC	GNLY	55	34	2.37	0.8284
ESCC	IL32	50	34	1.757	0.9614
ESCC	CPA3	37	37	2.649	0.9422
ESCC	TPSAB1	36	36	3.263	0.9703
ESCC	IGKC	35	31	3.756	0.7974
ESCC	TPSB2	35	35	2.827	0.9632
ESCC	IFI30	34	30	2.772	0.9451
GBC	CCL5	12	4	1.724	0.9688
GBC	NKG7	11	3	1.558	0.9875
GBC	HLA-DRA	10	4	2.569	0.9931
GBC	GNLY	10	4	1.875	0.9202
GBC	CD74	8	4	2.37	0.9996
GBC	IL7R	8	3	1.167	0.8815
GBC	GZMB	6	3	2.038	0.9753
GBC	GZMK	6	4	1.236	0.7738
GBC	CST3	5	4	2.932	0.9252
GBC	IL32	5	3	1.281	0.9463
GBC	JCHAIN	4	3	3.663	0.9492
GBC	S100A9	4	3	2.982	0.9362
GC	NKG7	23	2	2.224	0.9996
GC	GNLY	13	3	2.592	0.959
GC	CCL5	13	2	2.067	0.9981
GC	LTB	12	3	1.424	0.9791
GC	LYZ	9	3	1.906	0.9619
GC	S100A8	8	3	2.369	0.9571
GC	S100A9	7	3	2.012	0.9486
GC	IL32	7	2	1.782	0.9963
GC	CST3	6	2	2.55	0.999
GC	HBB	5	1	6.159	1
GC	IFITM3	5	3	2.508	0.9967
GC	HBA2	4	1	3.49	1
HCC	HLA-DRA	20	9	2.812	0.9923
HCC	CD74	18	8	2.516	0.9976
HCC	CCL5	16	8	1.761	0.9217
HCC	S100A8	13	7	2.767	0.9575
HCC	S100A9	12	6	2.998	0.9829
HCC	IGFBP7	12	6	2.393	0.9617
HCC	IGHG1	11	8	4.707	0.9672
HCC	CST3	10	6	3.199	0.9894
HCC	IGHG4	9	6	4.378	0.9748
HCC	IGKC	9	6	3.992	0.9759
HCC	NKG7	9	5	1.785	0.9899
HCC	CD52	9	7	1.428	0.9599
HGSOC	MECOM	3	1	1.602	0.9831
HGSOC	MACROD2	3	1	1.3	0.957
HGSOC	SPP1	2	1	3.477	0.9933
HGSOC	FTL	2	1	3.44	0.9958
HGSOC	ZEB2	2	1	2.578	1
HGSOC	GNLY	2	2	2.412	0.9066
HGSOC	CCL5	2	2	2.193	0.9583
HGSOC	RPS27	2	1	1.799	0.9654
HGSOC	SLC4A10	2	1	1.653	0.9038
HGSOC	RHEX	2	1	1.581	0.9986
HGSOC	WFDC2	2	1	1.527	0.9954
HGSOC	THEMIS	2	1	1.486	0.939
HNSCC	MALAT1	10	3	1.814	0.997
HNSCC	CXCL8	8	3	2.702	0.9417
HNSCC	KRT14	7	3	2.666	0.9946
HNSCC	HLA-DRA	7	3	1.945	0.9202
HNSCC	S100A8	5	3	3.13	0.9871
HNSCC	S100A9	5	3	2.782	0.9478
HNSCC	S100A2	5	3	2.2	0.9858
HNSCC	COL1A1	4	3	2.763	0.9536
HNSCC	IGKC	4	3	2.32	0.77
HNSCC	CD74	4	3	2.094	0.9423
HNSCC	IGFBP7	4	3	2.059	0.9467
HNSCC	CCL5	4	3	1.983	0.8988
HSCC	HLA-DRA	12	5	2.241	1
HSCC	CD74	10	5	1.92	1
HSCC	IGFBP7	7	4	2.646	0.9735
HSCC	CD69	7	5	1.202	0.8958
HSCC	IGKC	6	5	4.095	0.9529
HSCC	SPARC	6	4	2.745	0.9874
HSCC	HMGB2	6	4	1.974	0.9564
HSCC	MS4A1	6	4	1.496	0.9692
HSCC	GZMB	5	5	2.955	0.9946
HSCC	COL3A1	5	3	2.751	0.9634
HSCC	TUBA1B	5	4	2.261	0.9845
HSCC	TPSAB1	4	4	4.768	1
LUSC	S100A8	19	9	1.934	0.9708
LUSC	NAMPT	19	9	1.521	0.9985
LUSC	CCL5	17	8	2.253	0.9578
LUSC	S100A9	17	9	1.805	0.9647
LUSC	HLA-DRA	12	8	2.559	0.9365
LUSC	IGKC	11	8	3.907	0.8316
LUSC	CXCL8	11	7	2.261	0.9245
LUSC	GNLY	10	8	2.644	0.8654
LUSC	NKG7	9	7	2.817	0.9908
LUSC	RPS27	9	4	2.462	0.9774
LUSC	MALAT1	9	5	1.636	0.9952
LUSC	TPSB2	7	7	4.105	0.989
MPLC	SFTPC	6	1	2.568	0.9963
MPLC	SFTPB	6	2	2.076	0.9483
MPLC	CCL5	5	2	1.729	0.9313
MPLC	TPSB2	3	2	3.383	0.9986
MPLC	TPSAB1	3	2	3.068	0.991
MPLC	CPA3	3	2	2.78	0.9907
MPLC	SFTPA1	3	1	2.362	1
MPLC	HLA-DRA	3	2	2.235	0.9952
MPLC	SFTPA2	3	1	1.998	0.9831
MPLC	NKG7	3	2	1.868	0.9117
MPLC	IL32	3	1	1.628	0.8841
MPLC	LYZ	3	2	1.402	0.7791
NB	CD74	14	4	2.533	0.9874
NB	HLA-DRA	10	4	1.95	0.9418
NB	KLRB1	7	3	1.74	0.9023
NB	STMN2	6	3	1.529	0.9778
NB	HMGB2	5	4	1.221	0.8072
NB	NPY	5	3	1.213	0.8588
NB	FTL	4	2	2.776	1
NB	SAT1	4	4	2.669	1
NB	APOE	4	4	2.333	0.8817
NB	NKG7	4	3	1.874	0.9396
NB	B2M	4	3	1.739	1
NB	TUBA1B	4	4	1.592	0.9695
NSCLC	IGFBP7	5	2	2.566	0.9647
NSCLC	PTGDS	5	3	1.982	0.817
NSCLC	MGP	4	3	2.54	0.9009
NSCLC	C1QA	4	1	1.951	0.9801
NSCLC	CCL5	4	2	1.581	0.7985
NSCLC	S100A6	4	1	0.7701	1
NSCLC	APOD	3	2	2.796	0.8767
NSCLC	IGKC	3	2	2.696	0.9074
NSCLC	PLP1	3	3	2.181	0.8967
NSCLC	C1QB	3	1	2.132	0.9867
NSCLC	SAA1	3	1	1.911	0.9954
NSCLC	SPP1	3	2	1.8	0.9637
OSCC	HLA-DRA	10	3	3.157	0.9836
OSCC	CD74	8	3	2.654	0.9727
OSCC	S100A8	7	3	3.463	0.9739
OSCC	S100A9	6	3	3.593	0.994
OSCC	IGKC	6	4	3.462	0.8229
OSCC	S100A2	5	3	2.605	0.9939
OSCC	TPSB2	4	3	3.368	0.996
OSCC	HLA-DRB1	4	1	3.015	0.9785
OSCC	CXCL8	4	3	2.448	0.9628
OSCC	KRT14	4	2	1.995	0.9769
OSCC	CCL5	4	3	1.897	0.9173
OSCC	JCHAIN	4	3	1.795	0.6107
PAAD	IGFBP7	4	2	2.808	0.9195
PAAD	HLA-DRA	4	2	2.21	0.9969
PAAD	NKG7	4	1	1.591	0.9431
PAAD	SPARCL1	3	2	1.942	0.8705
PAAD	CXCR4	3	1	1.154	0.9683
PAAD	CCL5	3	1	1.127	0.9195
PAAD	PTPRC	3	1	0.9784	0.961
PAAD	IL7R	3	2	0.9556	0.815
PAAD	IGKC	2	2	2.775	0.7803
PAAD	COL1A2	2	2	2.584	0.8473
PAAD	CPA3	2	2	2.252	0.938
PAAD	HLA-DRB1	2	2	2.21	0.9821
PDAC	CD74	52	31	2.2	0.9907
PDAC	HLA-DRA	50	31	2.21	0.9723
PDAC	CCL5	41	26	1.594	0.897
PDAC	FXYD2	36	21	1.852	0.9684
PDAC	IGFBP7	34	21	2.179	0.9582
PDAC	SLC4A4	28	13	1.772	0.9808
PDAC	INS	25	21	4.012	0.9493
PDAC	ADIRF	25	21	2.209	0.9602
PDAC	FABP5	23	13	1.913	0.9588
PDAC	CFTR	23	13	1.565	0.98
PDAC	PRSS1	21	14	3.39	0.9872
PDAC	S100A6	21	15	1.996	0.9871
PTC	IGFBP7	17	7	2.927	0.9682
PTC	CCL5	14	7	1.901	0.9285
PTC	HLA-DRA	13	6	3.019	0.9673
PTC	CD74	12	7	2.35	0.9638
PTC	TG	12	6	1.794	0.9453
PTC	PTPRC	8	4	1.689	0.9462
PTC	RGS5	7	6	2.704	0.9462
PTC	CLU	7	5	1.765	0.9222
PTC	IGKC	6	4	3.797	0.875
PTC	MGP	6	6	2.836	0.9486
PTC	GNLY	6	6	2.49	0.8854
PTC	NPC2	6	3	1.774	0.9924
SACC	HLA-DRA	8	4	2.424	0.9164
SACC	DCN	7	3	2.636	0.9685
SACC	KRT14	6	4	2.359	0.9665
SACC	CD74	5	4	2.888	0.9512
SACC	HLA-DPA1	5	3	2.376	0.9141
SACC	SRGN	5	3	1.991	0.9742
SACC	MGP	5	3	1.983	0.9848
SACC	CXCR4	5	4	1.699	0.9277
SACC	IGFBP7	4	3	2.094	0.9637
SACC	PTPRC	4	3	1.408	0.9459
SACC	TPSB2	3	3	3.62	1
SACC	IGKC	3	2	3.545	0.8227
SCCIS	KRT15	2	1	2.225	0.9499
SCCIS	COL1A2	2	1	2.16	0.9033
SCCIS	KRT14	2	1	2.019	0.9611
SCCIS	RGS5	2	1	1.889	0.9406
SCCIS	DMKN	1	1	3.324	0.9849
SCCIS	KRT10	1	1	3.303	0.9899
SCCIS	DCN	1	1	3.27	1
SCCIS	FABP5	1	1	3.255	0.995
SCCIS	CFD	1	1	3.175	0.9784
SCCIS	S100A2	1	1	3.11	1
SCCIS	CD74	1	1	2.314	0.9892
SCCIS	CCL14	1	1	2.16	0.81
SCE	IGFBP7	4	3	2.689	0.9318
SCE	APOE	4	2	2.013	0.877
SCE	CCL4	4	2	1.838	0.9965
SCE	IL32	4	2	1.802	0.9106
SCE	HLA-DRA	3	2	2.457	0.9744
SCE	HSPA1A	3	3	2.143	0.9754
SCE	MGP	3	2	2.049	0.7306
SCE	CD52	3	3	2.042	0.9107
SCE	HSPA1B	3	3	1.918	0.9807
SCE	CCL2	3	2	1.785	0.9863
SCE	PLP1	2	2	3.372	0.9053
SCE	CCL3	2	2	3.289	0.9692
SKCM	HLA-DRA	12	3	2.953	0.9975
SKCM	CCL5	6	3	1.588	0.9676
SKCM	LYZ	5	3	3.125	0.9704
SKCM	CD74	5	3	2.465	0.9986
SKCM	GNLY	5	2	1.801	0.7032
SKCM	IL7R	5	2	0.9476	0.9021
SKCM	CST3	4	2	3.043	0.98
SKCM	CXCL8	4	3	2.68	0.9326
SKCM	IKZF2	4	3	1.344	0.8753
SKCM	IL32	4	3	1.205	0.9101
SKCM	IGKC	3	3	4.387	0.8765
SKCM	TPSB2	3	3	3.12	0.9951
STAD	MDK	3	1	1.057	0.8728
STAD	OLFM4	2	1	1.557	0.9479
STAD	SRGN	2	1	1.514	0.9412
STAD	REG1A	2	1	1.381	0.9176
STAD	TUBA1A	2	1	0.923	0.7255
STAD	TFF1	1	1	5.066	1
STAD	TPSB2	1	1	3.608	1
STAD	TFF3	1	1	3.508	1
STAD	MUC5AC	1	1	3.126	1
STAD	SPINK4	1	1	2.917	0.9649
STAD	TFF2	1	1	2.767	0.9375
STAD	FABP1	1	1	2.652	0.9276
TNBC	MALAT1	3	1	2.731	1
TNBC	SPP1	2	1	3.934	0.9688
TNBC	APOE	2	1	3.132	0.9464
TNBC	HBB	1	1	6.448	1
TNBC	IGKC	1	1	6.432	0.9643
TNBC	IGHG3	1	1	6.211	1
TNBC	HBA2	1	1	6.143	1
TNBC	HBA1	1	1	5.285	1
TNBC	IGHG4	1	1	5.14	1
TNBC	CD74	1	1	4.214	1
TNBC	NEAT1	1	1	3.142	0.9813
TNBC	PLP1	1	1	3.052	0.9556
dCCA	NKG7	13	3	1.917	0.9692
dCCA	CD74	9	3	2.294	0.9968
dCCA	HLA-DRA	9	3	2.108	0.9873
dCCA	CCL5	9	3	1.722	0.9363
dCCA	GNLY	6	2	2.165	0.9447
dCCA	S100A6	5	2	2.557	0.9643
dCCA	CCL4	4	2	1.685	0.681
dCCA	IL32	4	2	1.501	0.9652
dCCA	CD3E	4	2	1.142	0.9484
dCCA	JCHAIN	3	3	4.284	0.9197
dCCA	IGKC	3	3	3.255	0.7881
dCCA	S100A8	3	3	2.861	0.8989
iCCA	NKG7	12	3	1.974	0.9729
iCCA	HLA-DRA	10	4	2.63	0.9603
iCCA	CD74	8	4	2.788	0.9935
iCCA	GNLY	8	4	2.158	0.8188
iCCA	CCL5	7	3	1.769	0.9806
iCCA	DEFB1	6	2	2.4	0.9386
iCCA	IL7R	6	4	1.108	0.8494
iCCA	IFI30	4	3	2.712	0.9843
iCCA	SPP1	4	2	2.679	0.936
iCCA	LTB	4	3	0.9698	0.8522
iCCA	TIMP1	3	2	3.492	0.9907
iCCA	MGP	3	2	3.487	0.9944

Donor Sample Index

173 visible donors with direct detail and UMAP links.

173 donors

Sample	Cancer Type	Cells	Clusters	QC	Matrix Status	Links
AM-036-01-1A	AM Acral Melanoma; Tumour	2,000 / 7,859	13	genes 2733 UMI 8139 mito 4.876	Matrix available	UMAP coordinates summary
AM-036-02-1A	AM Acral Melanoma; Tumour	2,000 / 7,722	13	genes 2557 UMI 7955 mito 4.78	Matrix available	UMAP coordinates summary
AM-036-03-1A	AM Acral Melanoma; Tumour	1,999 / 3,000	10	genes 302.2 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
AM-036-04-1A	AM Acral Melanoma; Tumour	2,000 / 9,192	15	genes 2950 UMI 9065 mito 5.345	Matrix available	UMAP coordinates summary
AM-036-05-1A	AM Acral Melanoma; Tumour	1,998 / 5,755	17	genes 3318 UMI 1.151e+04 mito 5.891	Matrix available	UMAP coordinates summary
AM-036-06-1A	AM Acral Melanoma; Tumour	1,872 / 1,872	14	genes 2422 UMI 7839 mito 3.289	Matrix available	UMAP coordinates summary
AM-036-07-1A	AM Acral Melanoma; Tumour	1,998 / 5,417	19	genes 2135 UMI 6038 mito 2.626	Matrix available	UMAP coordinates summary
BRCA-071-13-1A	BRCA Breast Cancer; PBMC	1,999 / 6,037	21	genes 2095 UMI 6147 mito 3.429	Matrix available	UMAP coordinates summary
BRCA-071-14-1A	BRCA Breast Cancer; Normal	1,999 / 4,708	17	genes 1738 UMI 4860 mito 5.584	Matrix available	UMAP coordinates summary
BRCA-071-15-1A	BRCA Breast Cancer; Normal	1,999 / 6,610	17	genes 2263 UMI 6600 mito 4.096	Matrix available	UMAP coordinates summary
BRCA-071-16-1A	BRCA Breast Cancer; Normal	1,998 / 3,514	19	genes 2094 UMI 7255 mito 4.129	Matrix available	UMAP coordinates summary
BRCA-071-17-1A	BRCA Breast Cancer; Normal	1,725 / 1,725	17	genes 2482 UMI 8439 mito 3.391	Matrix available	UMAP coordinates summary
BRCA-128-01-1A	BRCA Breast Cancer; Tumour	1,998 / 3,000	10	genes 1078 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
CM-036-01-1A	CM Cutaneous Melanoma; Tumour	2,000 / 4,474	15	genes 1353 UMI 2905 mito 3.154	Matrix available	UMAP coordinates summary
CM-036-02-1A	CM Cutaneous Melanoma; Tumour	1,999 / 4,155	16	genes 3360 UMI 9388 mito 5.452	Matrix available	UMAP coordinates summary
CM-036-03-1A	CM Cutaneous Melanoma; Tumour	2,000 / 5,001	16	genes 1264 UMI 2982 mito 2.571	Matrix available	UMAP coordinates summary
CM-036-04-1A	CM Cutaneous Melanoma; Tumour	2,000 / 7,738	16	genes 2882 UMI 8069 mito 5.36	Matrix available	UMAP coordinates summary
CRC-073-01-1A	CRC Colorectal Cancer; Tumour	1,996 / 1,996	15	genes 2005 UMI 8122 mito 4.167	Matrix available	UMAP coordinates summary
CRC-073-02-1A	CRC Colorectal Cancer; Tumour	1,999 / 2,213	15	genes 1522 UMI 5350 mito 3.094	Matrix available	UMAP coordinates summary
CRC-073-03-1A	CRC Colorectal Cancer; Normal	1,999 / 2,186	19	genes 2103 UMI 1.329e+04 mito 4.433	Matrix available	UMAP coordinates summary
CaCx-120-01-1A	CaCx Cervical Cancer; Tumour	2,000 / 3,000	10	genes 1042 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
ESCC-111-07-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,998 / 4,480	22	genes 1979 UMI 7679 mito 2.999	Matrix available	UMAP coordinates summary
ESCC-111-08-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,572	18	genes 2322 UMI 8505 mito 3.543	Matrix available	UMAP coordinates summary
ESCC-111-09-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,998 / 5,362	21	genes 2191 UMI 7036 mito 3.422	Matrix available	UMAP coordinates summary
ESCC-111-10-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,616	16	genes 2154 UMI 7854 mito 2.657	Matrix available	UMAP coordinates summary
ESCC-111-11-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 2,367	20	genes 2420 UMI 9047 mito 3.302	Matrix available	UMAP coordinates summary
ESCC-111-12-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,295	22	genes 2216 UMI 7556 mito 4.177	Matrix available	UMAP coordinates summary
ESCC-111-13-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,998 / 4,049	23	genes 2352 UMI 8107 mito 3.629	Matrix available	UMAP coordinates summary
ESCC-111-14-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,000	10	genes 101.7 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
ESCC-111-21-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 7,767	23	genes 1801 UMI 6302 mito 3.411	Matrix available	UMAP coordinates summary
ESCC-111-22-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 3,953	20	genes 2400 UMI 9530 mito 3.569	Matrix available	UMAP coordinates summary
ESCC-111-23-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,492	21	genes 2049 UMI 6524 mito 2.656	Matrix available	UMAP coordinates summary
ESCC-111-24-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 9,895	13	genes 776.9 UMI 1843 mito 2.451	Matrix available	UMAP coordinates summary
ESCC-111-25-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,678	21	genes 2138 UMI 6434 mito 1.916	Matrix available	UMAP coordinates summary
ESCC-111-26-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 3,000	10	genes 528.4 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
ESCC-111-31-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,064	22	genes 1787 UMI 5034 mito 4.179	Matrix available	UMAP coordinates summary
ESCC-111-32-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 2,509	17	genes 2038 UMI 7786 mito 2.977	Matrix available	UMAP coordinates summary
ESCC-111-33-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,201	24	genes 2155 UMI 7160 mito 3.465	Matrix available	UMAP coordinates summary
ESCC-111-34-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 3,658	17	genes 2228 UMI 7661 mito 3.738	Matrix available	UMAP coordinates summary
ESCC-111-35-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,155 / 1,155	11	genes 2028 UMI 9477 mito 3.052	Matrix available	UMAP coordinates summary
ESCC-111-36-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,328	19	genes 2040 UMI 7212 mito 4.31	Matrix available	UMAP coordinates summary
ESCC-111-37-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,521	19	genes 1898 UMI 5987 mito 3.533	Matrix available	UMAP coordinates summary
ESCC-111-38-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,453	19	genes 2418 UMI 8013 mito 4.107	Matrix available	UMAP coordinates summary
ESCC-111-39-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,618	15	genes 1960 UMI 6875 mito 3.505	Matrix available	UMAP coordinates summary
ESCC-111-40-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,237	18	genes 1858 UMI 5442 mito 4.879	Matrix available	UMAP coordinates summary
ESCC-111-41-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,682	19	genes 1890 UMI 6729 mito 3.07	Matrix available	UMAP coordinates summary
ESCC-111-42-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,897	10	genes 472.7 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
ESCC-111-49-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,408	12	genes 1746 UMI 4796 mito 2.437	Matrix available	UMAP coordinates summary
ESCC-111-50-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,076	16	genes 1889 UMI 7276 mito 1.89	Matrix available	UMAP coordinates summary
ESCC-111-51-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,103	18	genes 2013 UMI 6495 mito 2.054	Matrix available	UMAP coordinates summary
ESCC-111-52-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,314	14	genes 1485 UMI 5176 mito 3.543	Matrix available	UMAP coordinates summary
ESCC-111-53-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,574	15	genes 1680 UMI 5244 mito 3.521	Matrix available	UMAP coordinates summary
ESCC-111-54-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,862	18	genes 1828 UMI 5976 mito 3.112	Matrix available	UMAP coordinates summary
ESCC-111-55-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,764	14	genes 1693 UMI 5215 mito 2.796	Matrix available	UMAP coordinates summary
ESCC-111-56-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 4,018	18	genes 2226 UMI 6910 mito 3.964	Matrix available	UMAP coordinates summary
ESCC-111-57-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,876	19	genes 2099 UMI 7157 mito 4.442	Matrix available	UMAP coordinates summary
ESCC-111-58-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,572	17	genes 2334 UMI 8975 mito 3.829	Matrix available	UMAP coordinates summary
ESCC-111-59-1A	ESCC Esophageal Squamous Cell Carcinoma; Normal	2,000 / 3,000	10	genes 1072 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
ESCC-126-09-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 2,755	17	genes 1576 UMI 4955 mito 4.034	Matrix available	UMAP coordinates summary
ESCC-126-10-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,157	18	genes 1844 UMI 6335 mito 3.899	Matrix available	UMAP coordinates summary
ESCC-126-11-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	1,999 / 3,113	18	genes 1835 UMI 6276 mito 3.833	Matrix available	UMAP coordinates summary
ESCC-126-12-1A	ESCC Esophageal Squamous Cell Carcinoma; Tumour	2,000 / 3,005	17	genes 1707 UMI 5660 mito 3.912	Matrix available	UMAP coordinates summary
GBC-066-01-1A	GBC Gallbladder Carcinoma; PBMC	2,000 / 5,291	19	genes 1554 UMI 4127 mito 3.331	Matrix available	UMAP coordinates summary
GBC-066-02-1A	GBC Gallbladder Carcinoma; Normal	1,999 / 2,527	18	genes 1730 UMI 5811 mito 2.603	Matrix available	UMAP coordinates summary
GBC-066-03-1A	GBC Gallbladder Carcinoma; Tumour	2,000 / 5,452	20	genes 1555 UMI 5516 mito 1.566	Matrix available	UMAP coordinates summary
GBC-066-04-1A	GBC Gallbladder Carcinoma; PBMC	2,000 / 6,480	16	genes 1292 UMI 3168 mito 2.694	Matrix available	UMAP coordinates summary
GC-035-03-1A	GC Gastric Cancer; PBMC	1,999 / 12,120	27	genes 1833 UMI 4784 mito 3.242	Matrix available	UMAP coordinates summary
GC-035-04-1A	GC Gastric Cancer; PBMC	2,000 / 15,287	34	genes 1454 UMI 4057 mito 3.714	Matrix available	UMAP coordinates summary
GC-035-05-1A	GC Gastric Cancer; PBMC	2,000 / 3,000	10	genes 932.7 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
HCC-059-01-1A	HCC Hepatocellular Cancer; Tumour	2,000 / 7,194	17	genes 1929 UMI 6085 mito 2.848	Matrix available	UMAP coordinates summary
HCC-059-02-1A	HCC Hepatocellular Cancer; Tumour	2,000 / 3,000	10	genes 1195 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
HCC-090-03-1H	HCC Hepatocellular Cancer; Tumour	804 / 804	10	genes 2462 UMI 1.166e+04 mito 6.964	Matrix available	UMAP coordinates summary
HCC-090-04-1H	HCC Hepatocellular Cancer; Tumour	1,998 / 2,424	21	genes 1912 UMI 8116 mito 6.873	Matrix available	UMAP coordinates summary
HCC-090-05-1H	HCC Hepatocellular Cancer; Normal	2,000 / 2,399	19	genes 1394 UMI 4343 mito 6.833	Matrix available	UMAP coordinates summary
HCC-090-06-1H	HCC Hepatocellular Cancer; Normal	2,000 / 5,451	20	genes 1759 UMI 7607 mito 6.606	Matrix available	UMAP coordinates summary
HCC-090-07-1H	HCC Hepatocellular Cancer; Normal	1,810 / 1,810	21	genes 1088 UMI 3369 mito 5.718	Matrix available	UMAP coordinates summary
HCC-090-08-1H	HCC Hepatocellular Cancer; Normal	2,000 / 2,718	18	genes 1402 UMI 5132 mito 6.892	Matrix available	UMAP coordinates summary
HCC-090-09-1H	HCC Hepatocellular Cancer; Normal	2,000 / 3,136	19	genes 1180 UMI 4280 mito 7.142	Matrix available	UMAP coordinates summary
HGSOC-042-03-1A	HGSOC High-grade Serous Ovarian Carcinoma; Tumour	2,000 / 6,277	18	genes 2507 UMI 6119 mito 4.929	Matrix available	UMAP coordinates summary
HGSOC-042-04-1A	HGSOC High-grade Serous Ovarian Carcinoma; Tumour	1,895 / 1,895	17	genes 2348 UMI 5957 mito 4.357	Matrix available	UMAP coordinates summary
HNSCC-127-01-1A	HNSCC Head and Neck Squamous Cell Carcinoma; Tumour	2,000 / 4,854	23	genes 1778 UMI 5126 mito 5.237	Matrix available	UMAP coordinates summary
HNSCC-127-02-1A	HNSCC Head and Neck Squamous Cell Carcinoma; Tumour	2,000 / 4,180	18	genes 2396 UMI 7146 mito 2.588	Matrix available	UMAP coordinates summary
HNSCC-127-03-1A	HNSCC Head and Neck Squamous Cell Carcinoma; Tumour	1,119 / 1,119	29	genes 1074 UMI 2743 mito 1.769	Matrix available	UMAP coordinates summary
HSCC-130-01-1H	HSCC Hypopharygeal Squamous Cell Carcinoma; Tumour	2,000 / 7,363	16	genes 1570 UMI 6163 mito 5.198	Matrix available	UMAP coordinates summary
HSCC-130-02-1H	HSCC Hypopharygeal Squamous Cell Carcinoma; Tumour	2,000 / 4,296	19	genes 1751 UMI 5362 mito 7.158	Matrix available	UMAP coordinates summary
HSCC-130-03-1H	HSCC Hypopharygeal Squamous Cell Carcinoma; Tumour	2,000 / 3,268	14	genes 1250 UMI 3322 mito 8.149	Matrix available	UMAP coordinates summary
HSCC-130-04-1H	HSCC Hypopharygeal Squamous Cell Carcinoma; Tumour	1,998 / 2,250	19	genes 1802 UMI 5958 mito 7.63	Matrix available	UMAP coordinates summary
HSCC-130-05-1H	HSCC Hypopharygeal Squamous Cell Carcinoma; Tumour	1,998 / 9,921	19	genes 1601 UMI 4909 mito 5.612	Matrix available	UMAP coordinates summary
LUSC-092-01-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	1,999 / 6,540	18	genes 1814 UMI 7052 mito 1.436	Matrix available	UMAP coordinates summary
LUSC-092-02-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	1,999 / 8,243	13	genes 2330 UMI 7539 mito 3.007	Matrix available	UMAP coordinates summary
LUSC-092-03-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 9,658	17	genes 1881 UMI 5608 mito 3.694	Matrix available	UMAP coordinates summary
LUSC-092-04-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 6,051	22	genes 2247 UMI 6008 mito 3.06	Matrix available	UMAP coordinates summary
LUSC-092-05-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 6,676	18	genes 2319 UMI 7749 mito 2.721	Matrix available	UMAP coordinates summary
LUSC-092-06-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 3,729	18	genes 1059 UMI 2658 mito 2.951	Matrix available	UMAP coordinates summary
LUSC-092-07-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 2,627	17	genes 2133 UMI 5473 mito 3.352	Matrix available	UMAP coordinates summary
LUSC-092-08-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 3,000	10	genes 913 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
LUSC-092-26-1A	LUSC Lung Squamous Cell Carcinoma; Tumour	2,000 / 3,605	16	genes 1860 UMI 6891 mito 1.463	Matrix available	UMAP coordinates summary
MPLC-068-06-1A	MPLC Multiple Primary Lung Cancer; Tumour	2,000 / 7,646	18	genes 2442 UMI 6782 mito 3.076	Matrix available	UMAP coordinates summary
MPLC-068-07-1A	MPLC Multiple Primary Lung Cancer; Tumour	2,000 / 6,955	19	genes 2164 UMI 5568 mito 2.779	Matrix available	UMAP coordinates summary
NB-033-03-1A	NB Neuroblastoma; Tumour	2,000 / 9,845	17	genes 1141 UMI 3549 mito 2.24	Matrix available	UMAP coordinates summary
NB-033-04-1A	NB Neuroblastoma; Tumour	2,000 / 2,659	11	genes 3343 UMI 9526 mito 5.059	Matrix available	UMAP coordinates summary
NB-033-05-1A	NB Neuroblastoma; Tumour	2,000 / 7,246	20	genes 2091 UMI 6757 mito 1.998	Matrix available	UMAP coordinates summary
NB-033-06-1A	NB Neuroblastoma; Tumour	2,000 / 8,055	18	genes 2393 UMI 6208 mito 3.668	Matrix available	UMAP coordinates summary
NB-033-07-1A	NB Neuroblastoma; Tumour	2,000 / 3,000	10	genes 314.1 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
NSCLC-007-01-1A	NSCLC Non-small Cell Lung Cancer; Tumour	2,000 / 13,382	15	genes 1590 UMI 4513 mito 4.813	Matrix available	UMAP coordinates summary
NSCLC-007-02-1A	NSCLC Non-small Cell Lung Cancer; Tumour	2,000 / 9,595	14	genes 1318 UMI 2877 mito 3.92	Matrix available	UMAP coordinates summary
NSCLC-007-03-1A	NSCLC Non-small Cell Lung Cancer; Tumour	1,999 / 5,169	21	genes 2262 UMI 8858 mito 3.982	Matrix available	UMAP coordinates summary
OSCC-074-01-1A	OSCC Oral Squamous Cell Carcinoma; Tumour	2,000 / 7,867	22	genes 2038 UMI 5562 mito 5.694	Matrix available	UMAP coordinates summary
OSCC-074-02-1A	OSCC Oral Squamous Cell Carcinoma; Tumour	1,999 / 10,209	19	genes 1775 UMI 6377 mito 2.166	Matrix available	UMAP coordinates summary
OSCC-074-03-1A	OSCC Oral Squamous Cell Carcinoma; Normal	1,998 / 8,613	18	genes 2280 UMI 8360 mito 3.44	Matrix available	UMAP coordinates summary
OSCC-074-04-1A	OSCC Oral Squamous Cell Carcinoma; Normal	2,000 / 3,000	10	genes 637.9 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
PAAD-038-01-1A	PAAD Pancreatic Cancer; Tumour	1,999 / 3,000	10	genes 859.5 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
PAAD-062-08-1A	PAAD Pancreatic Cancer; Tumour	2,000 / 4,606	21	genes 1824 UMI 5406 mito 5.124	Matrix available	UMAP coordinates summary
PDAC-027-01-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,998 / 2,122	17	genes 1178 UMI 2823 mito 3.777	Matrix available	UMAP coordinates summary
PDAC-027-02-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 4,146	19	genes 1190 UMI 3501 mito 4.346	Matrix available	UMAP coordinates summary
PDAC-027-03-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,999 / 2,237	15	genes 1311 UMI 3472 mito 4.908	Matrix available	UMAP coordinates summary
PDAC-027-04-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,527 / 1,527	21	genes 1626 UMI 4504 mito 4.853	Matrix available	UMAP coordinates summary
PDAC-027-05-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 2,761	18	genes 1206 UMI 3083 mito 4.921	Matrix available	UMAP coordinates summary
PDAC-027-06-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,999 / 3,351	20	genes 1688 UMI 4893 mito 4.103	Matrix available	UMAP coordinates summary
PDAC-027-07-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,639 / 1,639	13	genes 1597 UMI 4530 mito 5.578	Matrix available	UMAP coordinates summary
PDAC-027-08-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 2,270	19	genes 1342 UMI 3947 mito 3.938	Matrix available	UMAP coordinates summary
PDAC-027-09-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,998 / 6,289	22	genes 1388 UMI 3847 mito 3.216	Matrix available	UMAP coordinates summary
PDAC-027-10-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,079 / 1,079	15	genes 1451 UMI 3916 mito 5.641	Matrix available	UMAP coordinates summary
PDAC-027-11-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 5,263	23	genes 1575 UMI 5137 mito 3.419	Matrix available	UMAP coordinates summary
PDAC-027-12-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,999 / 3,000	10	genes 1421 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
PDAC-027-24-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 4,932	18	genes 1292 UMI 3628 mito 4.975	Matrix available	UMAP coordinates summary
PDAC-027-25-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 6,724	18	genes 1727 UMI 3885 mito 4.1	Matrix available	UMAP coordinates summary
PDAC-027-26-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 4,438	17	genes 1738 UMI 4605 mito 5.307	Matrix available	UMAP coordinates summary
PDAC-027-27-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	1,973 / 1,973	15	genes 1063 UMI 2342 mito 5.97	Matrix available	UMAP coordinates summary
PDAC-027-28-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 2,876	15	genes 2394 UMI 5518 mito 6.592	Matrix available	UMAP coordinates summary
PDAC-027-29-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	1,998 / 2,798	13	genes 1761 UMI 3347 mito 6.068	Matrix available	UMAP coordinates summary
PDAC-027-30-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 2,912	14	genes 1824 UMI 3823 mito 6.397	Matrix available	UMAP coordinates summary
PDAC-027-31-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 4,204	15	genes 1601 UMI 3425 mito 5.339	Matrix available	UMAP coordinates summary
PDAC-027-32-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 3,022	15	genes 2047 UMI 5402 mito 6.035	Matrix available	UMAP coordinates summary
PDAC-027-33-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 6,146	18	genes 1916 UMI 4785 mito 5.533	Matrix available	UMAP coordinates summary
PDAC-027-34-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 4,160	17	genes 1565 UMI 3756 mito 2.131	Matrix available	UMAP coordinates summary
PDAC-044-01-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 4,143	16	genes 2046 UMI 6375 mito 4.508	Matrix available	UMAP coordinates summary
PDAC-044-02-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	1,998 / 3,147	20	genes 2548 UMI 8031 mito 3.12	Matrix available	UMAP coordinates summary
PDAC-044-03-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 4,515	18	genes 1997 UMI 5978 mito 3.921	Matrix available	UMAP coordinates summary
PDAC-044-04-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 3,000	10	genes 1556 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
PDAC-046-08-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 5,196	22	genes 2373 UMI 8164 mito 4.158	Matrix available	UMAP coordinates summary
PDAC-046-09-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	689 / 689	11	genes 2170 UMI 1.825e+04 mito 5.402	Matrix available	UMAP coordinates summary
PDAC-046-10-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 2,562	18	genes 2127 UMI 9288 mito 4.695	Matrix available	UMAP coordinates summary
PDAC-046-11-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 2,022	18	genes 2360 UMI 8540 mito 4.883	Matrix available	UMAP coordinates summary
PDAC-046-12-1A	PDAC Pancreatic Ductal Adenocarcinoma; Normal	2,000 / 5,736	18	genes 2213 UMI 7008 mito 5.208	Matrix available	UMAP coordinates summary
PDAC-106-01-1A	PDAC Pancreatic Ductal Adenocarcinoma; Tumour	2,000 / 3,000	10	genes 1634 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
PTC-069-01-1A	PTC Papillary Thyroid Carcinoma; Tumour	1,998 / 2,473	18	genes 2805 UMI 8063 mito 4.011	Matrix available	UMAP coordinates summary
PTC-069-02-1A	PTC Papillary Thyroid Carcinoma; Tumour	2,000 / 2,530	16	genes 2786 UMI 9150 mito 4.366	Matrix available	UMAP coordinates summary
PTC-069-03-1A	PTC Papillary Thyroid Carcinoma; Tumour	2,000 / 2,831	18	genes 2684 UMI 7823 mito 4.503	Matrix available	UMAP coordinates summary
PTC-069-04-1A	PTC Papillary Thyroid Carcinoma; Tumour	2,000 / 4,121	14	genes 3061 UMI 8098 mito 3.229	Matrix available	UMAP coordinates summary
PTC-069-05-1A	PTC Papillary Thyroid Carcinoma; Tumour	1,999 / 2,856	20	genes 2302 UMI 8248 mito 3.308	Matrix available	UMAP coordinates summary
PTC-069-06-1A	PTC Papillary Thyroid Carcinoma; Tumour	2,000 / 2,527	15	genes 2867 UMI 8362 mito 3.726	Matrix available	UMAP coordinates summary
PTC-069-07-1A	PTC Papillary Thyroid Carcinoma; Normal	2,000 / 3,641	16	genes 2147 UMI 5384 mito 4.417	Matrix available	UMAP coordinates summary
SACC-103-03-1A	SACC Salivary Adenoid Cystic Carcinoma; Tumour	2,000 / 6,326	16	genes 2778 UMI 8263 mito 3.081	Matrix available	UMAP coordinates summary
SACC-103-04-1A	SACC Salivary Adenoid Cystic Carcinoma; Tumour	1,999 / 5,601	18	genes 2496 UMI 8600 mito 3.617	Matrix available	UMAP coordinates summary
SACC-103-05-1A	SACC Salivary Adenoid Cystic Carcinoma; Normal	1,999 / 9,271	21	genes 2043 UMI 6389 mito 5.456	Matrix available	UMAP coordinates summary
SACC-103-06-1A	SACC Salivary Adenoid Cystic Carcinoma; Normal	1,996 / 8,429	25	genes 1800 UMI 5577 mito 2.714	Matrix available	UMAP coordinates summary
SCCIS-099-01-1A	SCCIS Squamous Cell Carcinoma in Situ; Tumour	1,999 / 3,000	10	genes 2234 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary
SCE-112-13-1A	SCE Spinal Ependymomas; Tumour	2,000 / 9,442	17	genes 2266 UMI 7131 mito 2.866	Matrix available	UMAP coordinates summary
SCE-112-14-1A	SCE Spinal Ependymomas; Tumour	1,999 / 2,195	16	genes 2468 UMI 9138 mito 3.263	Matrix available	UMAP coordinates summary
SCE-112-15-1A	SCE Spinal Ependymomas; Tumour	2,000 / 10,292	12	genes 2456 UMI 5151 mito 3.59	Matrix available	UMAP coordinates summary
SKCM-095-01-1A	SKCM Melanoma; Tumour	1,999 / 8,817	16	genes 1877 UMI 5383 mito 4.055	Matrix available	UMAP coordinates summary
SKCM-095-02-1A	SKCM Melanoma; Tumour	1,999 / 10,724	21	genes 1650 UMI 4365 mito 2.151	Matrix available	UMAP coordinates summary
SKCM-095-03-1A	SKCM Melanoma; Tumour	2,000 / 7,839	20	genes 2083 UMI 7266 mito 2.972	Matrix available	UMAP coordinates summary
STAD-014-01-1A	STAD Stomach Adenocarcinoma; Tumour	1,467 / 1,467	13	genes 2152 UMI 9763 mito 6.231	Matrix available	UMAP coordinates summary
TNBC-008-01-1A	TNBC Triple Negative Breast Cancer; Tumour	1,744 / 1,744	13	genes 1394 UMI 5299 mito 2.544	Matrix available	UMAP coordinates summary
dCCA-066-01-1A	dCCA Distal Cholangiocarcinoma; PBMC	2,000 / 5,097	21	genes 1579 UMI 4466 mito 2.965	Matrix available	UMAP coordinates summary
dCCA-066-02-1A	dCCA Distal Cholangiocarcinoma; Normal	1,998 / 3,485	16	genes 1511 UMI 4610 mito 2.946	Matrix available	UMAP coordinates summary
dCCA-066-03-1A	dCCA Distal Cholangiocarcinoma; Tumour	2,000 / 2,684	19	genes 1860 UMI 6142 mito 3	Matrix available	UMAP coordinates summary
iCCA-066-01-1A	iCCA Intrahepatic Cholangiocarcinoma; Tumour	1,999 / 2,952	19	genes 1989 UMI 6237 mito 2.381	Matrix available	UMAP coordinates summary
iCCA-066-02-1A	iCCA Intrahepatic Cholangiocarcinoma; PBMC	2,000 / 4,950	17	genes 1478 UMI 4243 mito 2.229	Matrix available	UMAP coordinates summary
iCCA-066-03-1A	iCCA Intrahepatic Cholangiocarcinoma; Tumour	1,999 / 3,981	21	genes 2177 UMI 6917 mito 2.388	Matrix available	UMAP coordinates summary
iCCA-066-04-1A	iCCA Intrahepatic Cholangiocarcinoma; Tumour	2,000 / 3,000	10	genes 1566 UMI mito	Matrix incomplete; redownload required	UMAP coordinates summary