P-M004
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-M004
Sample ID
S-M004-1, S-M004-2, S-M004-3, S-M004-4, S-M004-5, S-M004-6
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Beijing
Age / Age Group
41 years
Sex
Female
Health Status
COVID-19 mild/moderate; sample time: progression/convalescence; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
B cells sorted from frozen PBMC (MACS, STEMCELL 19054)
Modality
scRNA-seq
Cell Count
49,223
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-M004; library samples: S-M004-1, S-M004-2, S-M004-3, S-M004-4, S-M004-5, S-M004-6; GSM accessions: GSM4787298, GSM4787299, GSM4787300, GSM4787301, GSM4787302, GSM4787303; batches: Batch10; cities: Beijing; severity: mild/moderate; sample time: progression/convalescence; sampling days after symptom onset: 10, 28; SARS-CoV-2: positive; BCR/TCR sequencing: Yes/No; per-sample cell counts: S-M004-1:6791; S-M004-2:11287; S-M004-3:8206; S-M004-4:6859; S-M004-5:9225; S-M004-6:6855; top major cell types: B:49194; Mega:12; Plasma:7; CD8:6; Mono:1; comorbidities: unknown; medications: Interferon atomization/ Lopinavir/ litonavir; UMAP export: X_umap from BLOOD0003.meta.h5ad, 46557 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
6
library sample ids
S-M004-1, S-M004-2, S-M004-3, S-M004-4, S-M004-5, S-M004-6
source reference
GSE158055 sample metadata/cell annotation; related source(s): unpublished
data accession
GSE158055; GSM4787298, GSM4787299, GSM4787300, GSM4787301, GSM4787302, GSM4787303
article url