P-M040
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-M040
Sample ID
S-M040-1, S-M040-2
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Shanghai
Age / Age Group
46 years
Sex
Male
Health Status
COVID-19 mild/moderate; sample time: convalescence; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
fresh PBMC, CD19+ B cell sorted from fresh PBMC (MACS)
Modality
scRNA-seq
Cell Count
27,525
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-M040; library samples: S-M040-1, S-M040-2; GSM accessions: GSM4787362, GSM4787363; batches: Batch13; cities: Shanghai; severity: mild/moderate; sample time: convalescence; sampling days after symptom onset: 26; SARS-CoV-2: positive; BCR/TCR sequencing: Yes/Yes/No; per-sample cell counts: S-M040-1:14565; S-M040-2:12960; top major cell types: B:13497; Mono:6462; CD8:4673; CD4:1255; NK:1234; comorbidities: none; medications: thymosin, no antibiotics and glucocorticoids; UMAP export: X_umap from BLOOD0003.meta.h5ad, 27016 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
2
library sample ids
S-M040-1, S-M040-2
source reference
GSE158055 sample metadata/cell annotation; related source(s): unpublished
data accession
GSE158055; GSM4787362, GSM4787363
article url