P-S007
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S007
Sample ID
S-S007-1, S-S007-2
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Guangzhou
Age / Age Group
26 years
Sex
Male
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
fresh Sputum
Modality
scRNA-seq
Cell Count
769
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S007; library samples: S-S007-1, S-S007-2; GSM accessions: GSM4787427, GSM4787428; batches: Batch14; cities: Guangzhou; severity: severe/critical; sample time: progression; sampling days after symptom onset: 33; SARS-CoV-2: positive; BCR/TCR sequencing: No/No; per-sample cell counts: S-S007-1:395; S-S007-2:374; top major cell types: Epi:369; Mono:278; Neu:70; Macro:38; DC:10; comorbidities: hypohepatia (may caused by the anti SARS-CoV-2 drugs); medications: methylprednisolone, Ribavirin; UMAP export: X_umap from BLOOD0003.meta.h5ad, 491 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
2
library sample ids
S-S007-1, S-S007-2
source reference
GSE158055 sample metadata/cell annotation; related source(s): unpublished
data accession
GSE158055; GSM4787427, GSM4787428
article url