P-S010
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S010
Sample ID
S-S010-1, S-S010-2
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Guangzhou
Age / Age Group
49 years
Sex
Male
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
fresh Sputum
Modality
scRNA-seq
Cell Count
1,170
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S010; library samples: S-S010-1, S-S010-2; GSM accessions: GSM4787433, GSM4787416; batches: Batch14; cities: Guangzhou; severity: severe/critical; sample time: progression; sampling days after symptom onset: 20, 32; SARS-CoV-2: positive; BCR/TCR sequencing: No/No; per-sample cell counts: S-S010-1:455; S-S010-2:715; top major cell types: Mono:754; Epi:179; Neu:162; Macro:41; DC:17; comorbidities: type 2 diabetes,chronic obstructive pulmonary disease,hyperuricemia,acute kidney injury,septic shock,hypertension,mediastinal emphysema; medications: Thymosin Alpha1, gama-globulin, Ribavirin; UMAP export: X_umap from BLOOD0003.meta.h5ad, 1011 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
2
library sample ids
S-S010-1, S-S010-2
source reference
GSE158055 sample metadata/cell annotation; related source(s): PMID: 32671793, unpublished
data accession
GSE158055; GSM4787433, GSM4787416
article url