P-S011
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S011
Sample ID
S-S011-1, S-S011-2
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Guangzhou
Age / Age Group
53 years
Sex
Male
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
fresh Sputum
Modality
scRNA-seq
Cell Count
2,198
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S011; library samples: S-S011-1, S-S011-2; GSM accessions: GSM4787434, GSM4787430; batches: Batch14; cities: Guangzhou; severity: severe/critical; sample time: progression; sampling days after symptom onset: 22, 36; SARS-CoV-2: positive; BCR/TCR sequencing: No/No; per-sample cell counts: S-S011-1:1925; S-S011-2:273; top major cell types: Mono:1097; Macro:415; Epi:295; Neu:277; DC:72; comorbidities: type 2 diabetes,coronary heart disease,type i respiratory failure; medications: Human Serum Albumin, Thymosin Alpha1, Diyushengbai tablet, Ribavirin; UMAP export: X_umap from BLOOD0003.meta.h5ad, 1746 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
2
library sample ids
S-S011-1, S-S011-2
source reference
GSE158055 sample metadata/cell annotation; related source(s): PMID: 32671793, unpublished
data accession
GSE158055; GSM4787434, GSM4787430
article url