P-S012
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S012
Sample ID
S-S012-1, S-S012-2, S-S012-3
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Guangzhou
Age / Age Group
58 years
Sex
Male
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
fresh Sputum
Modality
scRNA-seq
Cell Count
4,091
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S012; library samples: S-S012-1, S-S012-2, S-S012-3; GSM accessions: GSM4787435, GSM4787417, GSM4787420; batches: Batch14; cities: Guangzhou; severity: severe/critical; sample time: progression; sampling days after symptom onset: 28, 37; SARS-CoV-2: positive; BCR/TCR sequencing: No/No; per-sample cell counts: S-S012-1:3331; S-S012-2:535; S-S012-3:225; top major cell types: Mono:2784; Epi:580; Neu:460; Macro:199; DC:44; comorbidities: acute kidney injury,myocardial damage, blood coagulation disorders,hypoproteinemia,pulmonary bullous,hepatic cyst,renal cyst; medications: Prednisone, methylprednisolone, methylprednisolone, Thymosin Alpha1, Ribavirin; UMAP export: X_umap from BLOOD0003.meta.h5ad, 3778 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
3
library sample ids
S-S012-1, S-S012-2, S-S012-3
source reference
GSE158055 sample metadata/cell annotation; related source(s): unpublished
data accession
GSE158055; GSM4787435, GSM4787417, GSM4787420
article url