P-S039
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S039
Sample ID
S-S039
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Beijing
Age / Age Group
66 years
Sex
Female
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: deceased
Tissue / Cell Source
frozen PBMC
Modality
scRNA-seq
Cell Count
1,830
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S039; library samples: S-S039; GSM accessions: GSM4787477; batches: Batch17; cities: Beijing; severity: severe/critical; sample time: progression; sampling days after symptom onset: 14; SARS-CoV-2: positive; BCR/TCR sequencing: No/Yes; per-sample cell counts: S-S039:1830; top major cell types: Mono:705; Mega:581; B:187; CD4:167; Plasma:98; comorbidities: none; medications: Diuretics, hypoglycemic drugs; UMAP export: X_umap from BLOOD0003.meta.h5ad, 1801 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
1
library sample ids
S-S039
source reference
GSE158055 sample metadata/cell annotation; related source(s): unpublished
data accession
GSE158055; GSM4787477
article url