P-S069
De-identified Human Immune Atlas donor/sample detail for COVID19_PBMC. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
P-S069
Sample ID
S-S069-1, S-S069-2, S-S069-3
Dataset
COVID19_PBMC
Cohort
GSE158055 COVID-19 atlas; Zhuhai
Age / Age Group
63 years
Sex
Female
Health Status
COVID-19 severe/critical; sample time: progression; SARS-CoV-2 positive; outcome: discharged
Tissue / Cell Source
frozen PBMC
Modality
scRNA-seq
Cell Count
6,120
Analysis Status
Published scRNA-seq metadata + local UMAP export
UMAP Status
Ready
Metadata / Source Notes
Official GEO patient ID: P-S069; library samples: S-S069-1, S-S069-2, S-S069-3; GSM accessions: GSM4787507, GSM4787508, GSM4787509; batches: Batch01; cities: Zhuhai; severity: severe/critical; sample time: progression; sampling days after symptom onset: 3, 9, 15; SARS-CoV-2: positive; BCR/TCR sequencing: No/No; per-sample cell counts: S-S069-1:637; S-S069-2:155; S-S069-3:5328; top major cell types: B:3662; Mono:1033; CD4:910; CD8:382; Plasma:49; comorbidities: none; medications: Arbidol hydrochloride, Moxifloxacin, Lopinavir/ ritonavir tablet; UMAP export: X_umap from BLOOD0003.meta.h5ad, 5615 cells in local filtered embedding
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
library count
3
library sample ids
S-S069-1, S-S069-2, S-S069-3
source reference
GSE158055 sample metadata/cell annotation; related source(s): PMID: 32759967
data accession
GSE158055; GSM4787507, GSM4787508, GSM4787509
article url