A005
De-identified Human Immune Atlas donor/sample detail for Neutrophil_LiverCancer_Nature_2022. The record preserves available public metadata while avoiding direct identifiers.
Primary Metadata
Core de-identified metadata fields migrated from the ImmuneAging donor manifest.
Donor ID
A005
Sample ID
A005_ICC, A005_ICC_N
Dataset
Neutrophil_LiverCancer_Nature_2022
Cohort
Human liver cancer cohort, 124 patients
Age / Age Group
46 years
Sex
Female
Health Status
Intrahepatic cholangiocarcinoma (ICC); TNM I; BCLC A
Tissue / Cell Source
tumor tissue; adjacent liver tissue
Modality
scRNA-seq
Cell Count
14,441
Analysis Status
Published scRNA-seq
UMAP Status
Ready
Metadata / Source Notes
Source: Nature Supplementary Table 1a/1b; patient samples: A005_ICC, A005_ICC_N; library samples: A005_ICC, A005_ICC_N; no. PB samples: 0; no. adjacent liver samples: 1; no. tumor samples: 1; differentiation: Low; venous invasion: 0; cirrhosis: 0
Additional Clinical / Source Fields
Supplementary source metadata retained from the migrated manifest where available.
cancer type
Intrahepatic cholangiocarcinoma
cancer type short
ICC
tnm stage
I
bclc stage
A
virus
HBV
tumor size cm
1*2
differentiation
Low
venous invasion
0
cirrhosis
0
afp ug l
2.2
ca199 u ml
8
cea ug l
2.19
library count
2
library sample ids
A005_ICC, A005_ICC_N
total reads
866478150
source reference
Xue et al., Nature 612, 141-147 (2022), Supplementary Table 1
data accession
PRJCA007744
article url