Cerebellum RNA-seq samples
A reproducible descriptive view of the deposited GSE227359 raw-count matrix: matrix-total CPM, sample composition, matrix-column sums, detected genes, high-expression ranking, and PCA. No differential-expression or causal claim is made.
Counts below refer only to the selected GSE227359 columns .
Number of biological sample columns per group
Per-sample total across all published gene rows
Range: 14.8Mโ20.5M counts. This is a matrix-column sum, not an independently reported sequencing depth.
Visual summaries retain replicate-level information and expose sample counts.
Exploratory structure in log2(CPM + 1)
PCA of centered log2(matrix-total CPM + 1), using up to 500 highest-variance genes with nonzero matrix-total CPM in at least 20% of selected samples.
Ranked by mean matrix-total CPM
The table is the text equivalent for the sample-level visualizations above.
| Sample | Species group | Tissue | Replicate | Matrix column sum | Genes at CPM โฅ 1 |
|---|---|---|---|---|---|
| LongTailedMacaque_1_Cerebellum | Long Tailed Macaque | Cerebellum | 1 | 16,335,301 | 12,345 |
| LongTailedMacaque_2_Cerebellum | Long Tailed Macaque | Cerebellum | 2 | 18,430,934 | 12,442 |
| LongTailedMacaque_3_Cerebellum | Long Tailed Macaque | Cerebellum | 3 | 14,820,194 | 12,520 |
| LongTailedMacaque_4_Cerebellum | Long Tailed Macaque | Cerebellum | 4 | 20,511,506 | 12,414 |
| LongTailedMacaque_5_Cerebellum | Long Tailed Macaque | Cerebellum | 5 | 16,717,518 | 12,422 |
| LongTailedMacaque_6_Cerebellum | Long Tailed Macaque | Cerebellum | 6 | 16,495,198 | 12,674 |
raw count / sum of all published matrix gene rows in the sample ร 1,000,000. A gene is called detected at CPM โฅ 1.
Top genes are ranked by mean CPM across the exact selected sample columns; no p-values are calculated.
SHA-256: 02ccd190468eb1709362fb90021f9cf97e48e464f7732a2d895a72c3a29d0d32