Public GEO sample · GSE213516

F40

This page shows local scanpy summaries for a public GEO processed sample from the Shanghai reference cohort. It is not a supercentenarian record, and the aging score is a heuristic proxy, not the published clock.

Back to Dataset Donors GEO GSE213516 PubMed

F40GEO sample code

6,041Cells

-0.106Mean heuristic aging

mediumAging flag

GEO sample metrics

Values come from the local GSE213516 processed object, not from a participant-level clinical manifest.

Sample ID

GSE213516-F40

GEO sample code

F40

GEO GSM

GSM6588519

Dataset

Supercentenarian single-cell aging clock

PMID

37379396

Sex from GEO code

Female

Age from GEO code

40 years (code suffix, not a clinical record)

Cells

6,041

Mean heuristic aging score

-0.1062

Median heuristic aging score

-0.1603

Cells with high aging (%)

5.13

B cells (%)

4.97

NK cells (%)

0.02

Monocytes (%)

1.54

CD8 T (%)

0.30

Mean genes / cell

1,853.5

Mean counts / cell

10,584.3

Mean mitochondrial %

3.29

Data location

GEO GSE213516 open (10/17 Shanghai reference processed); supercentenarian hum0229 not local

Dataset-level analysis figures

These plots describe the 10-sample local object. They are shared across GSE213516 sample pages.

**UMAP (Leiden 0.8)** Dataset-level embedding of the local GSE213516 processed object.

**UMAP by GEO sample** Same embedding coloured by the 10 public GEO sample codes.

**Broad cell composition** Per-sample percentages for B, NK, monocytes and CD8 T (heuristic labels).

**Heuristic aging score by sample** Not the published Supercentenarian clock. Higher = more aged/stressed signature in this object.

**Heuristic aging score on UMAP** Cell-level heuristic score projected on the same UMAP.

**Leiden marker dotplot** Ranked markers for Leiden 0.8 clusters in the local processed object.

Supercentenarian samples remain unavailable locally (NBDC hum0229). Tracking IDs such as LC-37379396-SC-001 are still aggregate-derived placeholders and are not linked to these GEO samples.