๐พ
Species
Groundhog
Marmota monax
Rodents
Species Overview
A large, stocky sciurid rodent native to eastern North America. Adults weigh 2โ6 kg, heaviest in autumn before hibernation. Body length is 40โ65 cm with a short, bushy tail. Fur is dense, grizzled brownish-gray. They have short, powerful limbs with strong claws for digging elaborate burrow systems (up to 20 m long, 1.5 m deep) with multiple entrances. Unlike most marmots, groundhogs are largely solitary. They are true hibernators, dormant from October to February, with body temperature dropping to ~3ยฐC. They are primarily herbivorous, eating grasses, clover, alfalfa, and garden vegetables, making them agricultural pests. They are also notable as the natural host of woodchuck hepatitis virus (WHV), closely related to human hepatitis B virus, making them an important model for HBV infection and hepatocellular carcinoma. Females produce one litter of 2โ6 pups after a 32-day gestation. Celebrated in North American culture via Groundhog Day (Feb. 2). Lifespan: 6โ14 years. IUCN: Least Concern.
Integrated UMAP Atlas & Gene Explorer
Provisional atlas release
This view is a provisional release built from a public dataset (PMID 41580091) that has not yet completed the LACA annotation pipeline: cell groups are unsupervised Leiden clusters without curated cell-type names, and the embedding was recomputed by LACA (normalize/HVG/PCA/UMAP) without batch correction. Gene search is disabled pending the curated release.
55,698 cells ยท provisional clusters Loading UMAP for Groundhogโฆ
Cell Distribution โ WebGL
Cells: 0Types: 0Zoom: 1.0x
โ UMAP_1
โ UMAP_2
Loading...
Cell Types
Loading cell types...
โ
Tissues
โ
Systems
โ
Samples
0
Total Cells
0
Cell Types
View by System
Biological System Atlas2Systems
View by Tissue
Tissue-Level Cell Distribution4Tissues
View by Cell Type
Cellular Composition Explorer91Cell Types

Adrenergic neurons
โ

Adventitial cells
โ

Amacrine cells
โ

Bipolar cells
โ

Cholangiocytes
โ

Cone cells
โ

Corticotropes
โ

Cycling basal cells
โ

Cycling Cells
โ

Cycling ciliated cells
โ

Cycling epithelial cells
โ

Cycling glandular cells
โ

Cycling intermediate cells
โ

Cycling luminal epithelial cells
โ

Cycling stereociliated cells
โ

Descending limb of loop of Henle cells
โ

Effector chondrocytes
โ

Endoneurial cells
โ

Enteric neuronal progenitor cells
โ

Enteric neurons
โ

Eosinophils
โ

Ependymal cells
โ

Epineurial cells
โ

Epithelial cells
โ

Fasciculata cells
โ

Fibrocartilage chondrocytes
โ

Follicular cells
โ

Folliculostellate cells
โ

Ganglion cells
โ

Gastric epithelial cells
โ

Glandular cells
โ

Glial cells
โ

Glomerulosa cells
โ

Gonadotropes
โ

Granule cells
โ

Granulocytes
โ

Granulosa cells
โ

Homeostatic chondrocytes
โ

Horizontal cells
โ

Hypertrophic chondrocytes
โ

Inflammatory chondrocytes
โ

Lactotropes
โ

Luminal epithelial cells
โ

Melanotropes
โ

Mesenchymal cells
โ

Motor neurons
โ

Muller cells
โ

Myotendinous junctions
โ

Natural killer cells
โ

Natural killer T cells
โ

Neural crest cells
โ

Neural progenitor cells
โ

Neuromuscular junctions
โ

Neurons
โ

Oocytes
โ

Osteoblasts
โ

Osteoclasts
โ

Other stromal cells
โ

Oviduct epithelial cells
โ

Perineurial cells
โ

Pinealocytes
โ

Pre-hypertrophic chondrocytes
โ

Pre-inflammatory chondrocytes
โ

Precursor fibrocartilage chondrocytes
โ

Principal like cells
โ

Progenitor-like epithelial cells
โ

Proliferative chondrocytes
โ

Prostate progenitor cells
โ

Pseudostratified columnar cells
โ

Radial glial cells
โ

Regulatory chondrocytes
โ

Reparative chondrocytes
โ

Retinal pigmentary epithelial cells
โ

Rod cells
โ

Satellite cells
โ

Seminal vesicle epithelial cells
โ

Serous cells
โ

Skeletal myonuclei
โ

Somatotropes
โ

Squamous cells
โ

Stereociliated cells
โ

Supporting cells of vestibular epithelium
โ

Surface epithelial cells
โ

T_NKT cells
โ

Taste cells
โ

Tendon cells
โ

Theca cells
โ

Thyrotropes
โ

Type I myonuclei
โ

Type II myonuclei
โ

Vestibular dark cells
โ
Related Species in Rodents
Arctic ground squirrel
Urocitellus parryii
Thirteen-lined ground squirrel
Ictidomys tridecemlineatus
Groundhog
Marmota monax
House mouse
Mus musculus
Norway rat
Rattus norvegicus
Mongolian gerbil
Meriones unguiculatus
Baird's deer mouse
Peromyscus maniculatus
Oldfield mouse
Peromyscus polionotus
Hispid cotton rat
Sigmodon hispidus
Golden hamster
Mesocricetus auratus
Chinese hamster
Cricetulus griseus
Galilee blind mole rat
Spalax galili
Guinea pig
Cavia porcellus
Long-tailed chinchilla
Chinchilla lanigera
Naked mole rat
Heterocephalus glaber
Cell Type
Expression
Coords





