Species / Rodents / House mouse

House mouse

Mus musculus
Rodents
4 yrs
Max Lifespan
25 g
Adult Weight
SP124
Species ID
31
Tissues
Statistics Analysis

Species Overview

The preeminent mammalian model organism in biomedical research. Originally from Central Asia, now cosmopolitan. Adults weigh 12โ€“40 g with a 7โ€“10 cm body and a scaly tail of similar length. Fur is grayish-brown dorsally, lighter ventrally. Mice are nocturnal, omnivorous, and extraordinarily prolific (5โ€“10 litters/year, 3โ€“14 pups each, gestation ~19โ€“21 days). Thousands of inbred strains (C57BL/6, BALB/c, etc.), knockout, transgenic, and humanized lines exist. The genome was sequenced in 2002 (2n=40, ~2.7 Gb), with ~23,000 protein-coding genes sharing extensive homology with humans. They are indispensable in genetics, immunology, oncology, neuroscience, developmental biology, and drug testing. Laboratory mice live 2โ€“3 years; wild mice 1โ€“2 years. Their small size, low cost, rapid breeding, and genetic tractability (CRISPR, Cre-lox) make them the backbone of modern biology. Nobel Prizes in physiology/medicine have been awarded for discoveries using mouse genetics. They are also a major global pest in agriculture and food storage.

Integrated UMAP Atlas & Gene Explorer

Data processing BioID-standardised Input: Processed matrix Methods Per-dataset records
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Cell Distribution โ€” WebGL
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Biological System Atlas
10Systems
Cardiovascular system
Cardiovascular system
ID: sys03
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Digestive system
Digestive system
ID: sys05
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Endocrine system
Endocrine system
ID: sys07
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Immune system
Immune system
ID: sys02
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Motor system
Motor system
ID: sys08
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Nervous system
Nervous system
ID: sys01
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Reproductive system
Reproductive system
ID: sys06
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Respiratory system
Respiratory system
ID: sys04
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Sensory system
Sensory system
ID: sys10
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Urinary system
Urinary system
ID: sys09
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View by Tissue

Tissue-Level Cell Distribution
24Tissues
Aorta
Aorta
ID: sys03tis01System: Cardiovascular system
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Bladder
Bladder
ID: sys09tis02System: Urinary system
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Bone marrow
Bone marrow
ID: sys02tis02System: Immune system
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Colon
Colon
ID: sys05tis07System: Digestive system
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Diaphragm
Diaphragm
ID: sys04tis04System: Respiratory system
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Heart
Heart
ID: sys03tis03System: Cardiovascular system
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Kidney
Kidney
ID: sys09tis01System: Urinary system
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Liver
Liver
ID: sys05tis01System: Digestive system
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Lung
Lung
ID: sys04tis01System: Respiratory system
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Mammary gland
Mammary gland
ID: sys06tis10System: Reproductive system
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Pancreas
Pancreas
ID: sys05tis04System: Digestive system
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Retina
Retina
ID: sys01tis18System: Nervous system
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Sciatic nerve
Sciatic nerve
ID: sys01tis21System: Nervous system
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Skeletal muscle
Skeletal muscle
ID: sys08tis01System: Motor system
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Skin
Skin
ID: sys10tis02System: Sensory system
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Spinal cord
Spinal cord
ID: sys01tis20System: Nervous system
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Spleen
Spleen
ID: sys02tis04System: Immune system
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Subcutaneous adipose
Subcutaneous adipose
ID: sys07tis04System: Endocrine system
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Testis
Testis
ID: sys06tis01System: Reproductive system
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Thymus
Thymus
ID: sys02tis01System: Immune system
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Tongue
Tongue
ID: sys05tis09System: Digestive system
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Trachea
Trachea
ID: sys04tis02System: Respiratory system
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Visceral adipose
Visceral adipose
ID: sys07tis05System: Endocrine system
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Whole brain
Whole brain
ID: sys01tis16System: Nervous system
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Cellular Composition Explorer
83Cell Types
Acinar cells
Acinar cells
Major: Epithelial cellโ€ฆ
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Alveolar type 1 cells
Alveolar type 1 cells
Major: Epithelial cellโ€ฆ
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Alveolar type 2 cells
Alveolar type 2 cells
Major: Epithelial cellโ€ฆ
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Amacrine cells
Amacrine cells
Major: Neural cells
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Ascending loop of Henle cells
Ascending loop of Henle cells
Major: Epithelial cellโ€ฆ
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Astrocytes
Astrocytes
Major: Neural cells
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B cells
B cells
Major: Immune cells
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Basal cells
Basal cells
Major: Epithelial cellโ€ฆ
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Bipolar cells
Bipolar cells
Major: Neural cells
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Cardiomyocytes
Cardiomyocytes
Major: Muscle cells
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Cholangiocytes
Cholangiocytes
Major: Epithelial cellโ€ฆ
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Ciliated cells
Ciliated cells
Major: Epithelial cellโ€ฆ
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Common myeloid progenitors
Common myeloid progenitors
Major: Immune cells
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Cone cells
Cone cells
Major: Neural cells
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Cycling cells
Major: Other
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Cycling epithelial cells
Cycling epithelial cells
Major: Epithelial cellโ€ฆ
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Cycling immune cells
Major: Immune cells
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Cycling immune or stromal cells
Major: Immune cells
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Cycling intermediate cells
Cycling intermediate cells
Major: Epithelial cellโ€ฆ
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Dendritic cells
Dendritic cells
Major: Immune cells
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Distal convoluted tubule cells
Distal convoluted tubule cells
Major: Epithelial cellโ€ฆ
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Endothelial cells
Endothelial cells
Major: Endothelial celโ€ฆ
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Enteric glial cells
Enteric glial cells
Major: Neural cells
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Enterocytes
Enterocytes
Major: Epithelial cellโ€ฆ
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Enteroendocrine cells
Enteroendocrine cells
Major: Epithelial cellโ€ฆ
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Ependymal cells
Ependymal cells
Major: Epithelial cellโ€ฆ
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Epithelial cells
Epithelial cells
Major: Epithelial cellโ€ฆ
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Erythroid cells
Erythroid cells
Major: Immune cells
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Erythroid progenitor cells
Major: Immune cells
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Excitatory neurons
Excitatory neurons
Major: Neural cells
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Fibroblasts
Fibroblasts
Major: Stromal cells
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Ganglion cells
Ganglion cells
Major: Neural cells
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Granule cells
Granule cells
Major: Neural cells
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Hematopoietic stem and progenitor cells
Hematopoietic stem and progenitor cells
Major: Immune cells
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Hepatocytes
Hepatocytes
Major: Epithelial cellโ€ฆ
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Immune cells
Major: Immune cells
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Inhibitory neurons
Inhibitory neurons
Major: Neural cells
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Intercalated cells
Intercalated cells
Major: Epithelial cellโ€ฆ
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Keratinocytes
Keratinocytes
Major: Epithelial cellโ€ฆ
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Kupffer cells
Kupffer cells
Major: Immune cells
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Luminal epithelial cells
Luminal epithelial cells
Major: Epithelial cellโ€ฆ
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Macrophages
Macrophages
Major: Immune cells
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Mast cells
Mast cells
Major: Immune cells
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Mesenchymal cells
Mesenchymal cells
Major: Stromal cells
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Mesothelial cells
Mesothelial cells
Major: Epithelial cellโ€ฆ
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Microglia
Microglia
Major: Immune cells
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Monocytes
Monocytes
Major: Immune cells
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Muller cells
Muller cells
Major: Neural cells
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Natural killer cells
Natural killer cells
Major: Immune cells
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Natural killer T cells
Natural killer T cells
Major: Immune cells
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Neuroendocrine cells
Neuroendocrine cells
Major: Epithelial cellโ€ฆ
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Oligodendrocyte progenitor cells
Oligodendrocyte progenitor cells
Major: Neural cells
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Oligodendrocytes
Oligodendrocytes
Major: Neural cells
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Pancreas ductal cells
Pancreas ductal cells
Major: Epithelial cellโ€ฆ
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Pancreas islet cells
Pancreas islet cells
Major: Epithelial cellโ€ฆ
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Pericytes
Pericytes
Major: Stromal cells
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Peritubular myoid cells
Peritubular myoid cells
Major: Stromal cells
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Placental trophoblasts
Major: Other
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Plasma B cells
Plasma B cells
Major: Immune cells
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Principal cells
Principal cells
Major: Epithelial cellโ€ฆ
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Proliferating neural progenitor cells
Major: Neural cells
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Proximal tubule cells
Proximal tubule cells
Major: Epithelial cellโ€ฆ
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Radial glial cells
Radial glial cells
Major: Neural cells
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Ribosomal protein-enriched cells
Ribosomal protein-enriched cells
Major: Other
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Ribosomal protein-expressing cells
Ribosomal protein-expressing cells
Major: Other
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Rod cells
Rod cells
Major: Neural cells
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Satellite cells
Satellite cells
Major: Muscle cells
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Schwann cells
Schwann cells
Major: Neural cells
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Sertoli cells
Sertoli cells
Major: Stromal cells
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Smooth muscle cells
Smooth muscle cells
Major: Muscle cells
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Spermatocytes
Spermatocytes
Major: Germ cells
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Spermatogonia
Spermatogonia
Major: Germ cells
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Stellate cells
Stellate cells
Major: Stromal cells
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Stromal cells
Stromal cells
Major: Stromal cells
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T cells
T cells
Major: Immune cells
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T_NKT cells
T_NKT cells
Major: Immune cells
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Taste cells
Taste cells
Major: Epithelial cellโ€ฆ
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Tendon cells
Tendon cells
Major: Stromal cells
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Thymocytes
Thymocytes
Abbr: TMajor: Immune cells
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Thyroid follicular cells
Major: Other
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Trophoblast cells
Major: Immune cells
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Type II myonuclei
Type II myonuclei
Major: Muscle cells
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Urothelial cells
Urothelial cells
Major: Epithelial cellโ€ฆ
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View Datasets

Species-Related Single-Cell Datasets
168Datasets
DataID โ†• Latin Name โ†• Folder ID โ†• Tissue โ†• Title โ†• Detail QC Analysis
Data0417 Mus musculus Mus_musculus_32669714_2020_Rank004 Brain A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0412 Mus musculus BS1739863311423 AUD A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0432 Mus musculus BS1739863460803 HIP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0439 Mus musculus BS1739860827859 HY - HYmm A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0473 Mus musculus BS1739863324319 MOp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0513 Mus musculus BS1739863198396 SSp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0519 Mus musculus BS1739861302523 STR - STRd A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0526 Mus musculus BS1739863175863 TH - Anterior A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0548 Mus musculus BS1739863237499 VISp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0503 Mus musculus Mus_musculus_38328114_2024_Rank001 Retina Comprehensive single-cell atlas of the mouse retina. QC Analysis
Data0539 Mus musculus Mus_musculus_30283141_2018_Rank010 Thymus Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0540 Mus musculus Mus_musculus_32669714_2020_Rank020 Thymus A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0457 Mus musculus Mus_musculus_30283141_2018_Rank007 Marrow Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0458 Mus musculus Mus_musculus_32669714_2020_Rank014 Marrow A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0510 Mus musculus Mus_musculus_30283141_2018_Rank009 Spleen Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0511 Mus musculus Mus_musculus_32669714_2020_Rank019 Spleen A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0411 Mus musculus Mus_musculus_32669714_2020_Rank001 Aorta A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0430 Mus musculus Mus_musculus_30283141_2018_Rank002 Heart Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0431 Mus musculus Mus_musculus_32669714_2020_Rank007 Heart A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0452 Mus musculus Mus_musculus_30283141_2018_Rank005 Lung Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0453 Mus musculus Mus_musculus_32669714_2020_Rank012 Lung A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0543 Mus musculus Mus_musculus_32669714_2020_Rank022 Trachea A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0423 Mus musculus Mus_musculus_32669714_2020_Rank005 Diaphragm A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0450 Mus musculus Mus_musculus_30283141_2018_Rank004 Liver Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0451 Mus musculus Mus_musculus_32669714_2020_Rank011 Liver A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0494 Mus musculus Mus_musculus_32669714_2020_Rank016 Pancreas A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0448 Mus musculus Mus_musculus_32669714_2020_Rank009 Large intestine A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0541 Mus musculus Mus_musculus_30283141_2018_Rank011 Tongue Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0542 Mus musculus Mus_musculus_32669714_2020_Rank021 Tongue A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0523 Mus musculus Mus_musculus_35794482_2022_Rank001 Testis Single-cell roadmap of human gonadal development. QC Analysis
Data0455 Mus musculus Mus_musculus_30283141_2018_Rank006 Mammary Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0456 Mus musculus Mus_musculus_32669714_2020_Rank013 Mammary A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0418 Mus musculus Mus_musculus_32669714_2020_Rank002 Brown adipose tissue A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0428 Mus musculus Mus_musculus_32669714_2020_Rank006 Gonadal adipose tissue A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0471 Mus musculus Mus_musculus_32669714_2020_Rank015 Mesenteric adipose tissue A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0521 Mus musculus Mus_musculus_32669714_2020_Rank017 Subcutaneous adipose tissue A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0477 Mus musculus Mus_musculus_30283141_2018_Rank008 Muscle Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0449 Mus musculus Mus_musculus_32669714_2020_Rank010 Limb muscle A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0446 Mus musculus Mus_musculus_30283141_2018_Rank003 Kidney Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0447 Mus musculus Mus_musculus_32669714_2020_Rank008 Kidney A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0414 Mus musculus Mus_musculus_30283141_2018_Rank001 Bladder Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. QC Analysis
Data0415 Mus musculus Mus_musculus_32669714_2020_Rank003 Bladder A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0508 Mus musculus Mus_musculus_32669714_2020_Rank018 Skin A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Analysis
Data0454 Mus musculus Mus_musculus_32426372_2020_Rank001 Lymph node A Single-Cell Transcriptional Roadmap of the Mouse and Human Lymph Node Lymphatic Vasculature. QC Analysis
Data0506 Mus musculus Mus_musculus_33305192_2020_Rank001 Salivary gland Generation of a Single-Cell RNAseq Atlas of Murine Salivary Gland Development. QC Analysis
Data0407 Mus musculus Mus_musculus_33571131_2021_Rank001 Adrenal gland Single-cell molecular profiling of all three components of the HPA axis reveals adrenal ABCB1 as a regulator of stress adaptation. QC Analysis
Data0507 Mus musculus Mus_musculus_33890853_2021_Rank001 Sciatic nerve Transcriptional profiling of mouse peripheral nerves to the single-cell level to build a sciatic nerve ATlas (SNAT). QC Analysis
Data0419 Mus musculus Mus_musculus_34200880_2021_Rank001 Cartilage Single-Cell RNA-Seq Reveals Transcriptomic Heterogeneity and Post-Traumatic Osteoarthritis-Associated Early Molecular Changes in Mouse Articular Chondrocytes. QC Analysis
Data0427 Mus musculus Mus_musculus_34650971_2021_Rank001 Gallbladder Single Cell RNA-Sequencing Reveals a Murine Gallbladder Cell Transcriptome Atlas During the Process of Cholesterol Gallstone Formation. QC Analysis
Data0509 Mus musculus Mus_musculus_37579960_2023_Rank001 Spinal cord Single-cell analysis of spinal cord injury reveals functional heterogeneity of oligodendrocyte lineage cells. QC Analysis
Data0405 Mus musculus BS1739863288222 ACA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0406 Mus musculus BS1739860845443 ACA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0408 Mus musculus BS1739860887112 AI-CLA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0409 Mus musculus BS1739863306763 AId-AIv A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0410 Mus musculus BS1739863299486 AId-AIv-AIp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0413 Mus musculus BS1739860862754 AUD-TEa-PERI-ECT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0420 Mus musculus BS1739860944772 CNU - PAL A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0421 Mus musculus BS1739863384010 CTXsp - CLA-EP-LA-BLA-BMA-PA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0422 Mus musculus BS1739860965606 CTXsp - CLA-EP-LA-BLA-BMA-PA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0424 Mus musculus BS1739863450644 ENT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0425 Mus musculus BS1739860993281 ENT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0429 Mus musculus BS1739861212841 HB - MY A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0433 Mus musculus BS1739861003507 HIP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0434 Mus musculus BS1739861012595 HIP - CA A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0435 Mus musculus BS1739860791506 HY - HYa1 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0436 Mus musculus BS1739860814142 HY - HYa2 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0437 Mus musculus BS1739860810459 HY - HYm2 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0438 Mus musculus BS1739860824150 HY - HYml A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0440 Mus musculus BS1739860831811 HY - HYpl A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0441 Mus musculus BS1739860820985 HY - HYpm A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0442 Mus musculus BS1739863397381 HY - MEZ-PVZ-PVR A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0443 Mus musculus BS1739860800885 HY - MEZ-PVZ-PVR A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0444 Mus musculus BS1739863407716 HY LZ A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0445 Mus musculus BS1739860794831 HY LZ A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0459 Mus musculus BS1739861171024 MB - IC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0460 Mus musculus BS1739861154361 MB - MRN-CUN-RN-RR-PN A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0461 Mus musculus BS1739861144365 MB - MRN-CUN-RN-RR-PPN-NB-SAG-PBG A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0462 Mus musculus BS1739861150651 MB - MRN-CUN-RN-RR-PPN-PRT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0463 Mus musculus BS1739861161580 MB - MRN-CUN-RN-RR-PPN-PRT-SC-IC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0464 Mus musculus BS1739861102021 MB - PAG-RAmb A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0465 Mus musculus BS1739861157365 MB - PRT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0466 Mus musculus BS1739863392806 MB - SC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0467 Mus musculus BS1739861133752 MB - SC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0468 Mus musculus BS1739861166833 MB - SC-IC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0469 Mus musculus BS1739861124965 MB - VTA-SN A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0470 Mus musculus BS1739861200831 MB-PONS - DR-PPN-SOC-V A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0472 Mus musculus BS1739860897055 MO-FRP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0474 Mus musculus BS1739860918783 MOp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0475 Mus musculus BS1739863345136 MOs-FRP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0476 Mus musculus BS1739860874860 MOs-FRP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0478 Mus musculus BS1739861233461 MY - AP-DCO-VCO-DCN-ECU-NTS A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0479 Mus musculus BS1739861225007 MY - CN-DCN-ECU-NTS-SPVC-SPVI-SPVO A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0480 Mus musculus BS1739861230535 MY - MYsat-MYmot A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0481 Mus musculus BS1739861216310 MY - MYsat-MYmot ant A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0482 Mus musculus BS1739861241000 MY - MYsat-MYmot post A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0483 Mus musculus BS1739861221213 MY - MYsat-Mymot-vent ant A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0484 Mus musculus BS1739861251012 MY - MYsat-MYmot-vent post A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0485 Mus musculus BS1739861246480 MY - SPVC-SPVI-SPVO A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0486 Mus musculus BS1739861206670 MY - VNC-PHY-DMX-XII A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0487 Mus musculus BS1739863423648 OLF - AON-TT-DP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0488 Mus musculus BS1739861021547 OLF - AON-TT-DP-PIR-COA-NLOT-PAA-TR A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0489 Mus musculus BS1739863412692 OLF - COA-PAA-NLOT-TR A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0490 Mus musculus BS1739863429720 OLF - MOB-AOB A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0491 Mus musculus BS1739861029415 OLF - MOB-AOB A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0492 Mus musculus BS1739863435526 OLF - PIR A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0495 Mus musculus BS1739863442894 PAR-POST-PRE-SUB-ProS A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0496 Mus musculus BS1739860981470 PAR-POST-PRE-SUB-ProS A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0497 Mus musculus BS1739863351412 PL-ILA-ORB A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0498 Mus musculus BS1739860854789 PL-ILA-ORB A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0499 Mus musculus BS1739861174605 PONS - Pmot-Psat ant A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0500 Mus musculus BS1739861190263 PONS - Pmot-Psat post A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0501 Mus musculus BS1739861183784 PONS - Psen A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0502 Mus musculus BS1739863365229 PTLp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0504 Mus musculus BS1739863370291 RSP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0505 Mus musculus BS1739860836099 RSP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0512 Mus musculus BS1739860880375 SS-GU-VISC A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0514 Mus musculus BS1739863211215 SSs-GU-VISC-AIp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0515 Mus musculus BS1739860868922 SSs-GU-VISC-AIp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0517 Mus musculus BS1739861291582 STR - LSX A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0518 Mus musculus BS1739861254459 STR - sAMY A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0520 Mus musculus BS1739861279883 STR - STRv A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0522 Mus musculus BS1739863222609 TEa-PERI-ECT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0524 Mus musculus BS1739861055217 TH A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0525 Mus musculus BS1739861070132 TH - AD-AV-AM-IAD-LD A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0527 Mus musculus BS1739861066800 TH - LGd-IGL-LGv A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0528 Mus musculus BS1739861084562 TH - MD-IMD-PCN-CL A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0529 Mus musculus BS1739861046025 TH - MG-SPFp-PP-POL-SGN-PoT-PIL A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0530 Mus musculus BS1739861077399 TH - MH-LH-LP A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0531 Mus musculus BS1739863183798 TH - Middle-lateral A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0532 Mus musculus BS1739863192455 TH - Middle-medial A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0533 Mus musculus BS1739861049802 TH - PF-SPA-SPFm-VPMpc-VPLpc-RT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0534 Mus musculus BS1739861099070 TH - PO-Eth A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0535 Mus musculus BS1739863188435 TH - Posterior A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0536 Mus musculus BS1739861094582 TH - PVT-PT A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0537 Mus musculus BS1739861039146 TH - RE-RH-CM-IAM-SMT-PR-Xi A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0538 Mus musculus BS1739861089910 TH - VAL-VPM-VPL-VM A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0544 Mus musculus BS1739863250617 VIS A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0545 Mus musculus BS1739863248210 VISa A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0546 Mus musculus BS1739863243742 VISl A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0547 Mus musculus BS1739863233473 VISm A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0549 Mus musculus BS1739860910968 VISp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0550 Mus musculus BS1739863381176 VISpos A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0551 Mus musculus BS1739860903656 VIS-PTLp A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain. QC Analysis
Data0493 Mus musculus Mus_musculus_38200272_2024_Rank001 Ovary A single-cell atlas of the aging mouse ovary. QC Analysis
Data0426 Mus musculus Mus_musculus_39550363_2024_Rank002 Esophagus Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages. QC Analysis
Data0516 Mus musculus Mus_musculus_39550363_2024_Rank001 Stomach Temporal single-cell RNA sequencing dataset of gastroesophagus development from embryonic to post-natal stages. QC Analysis
Data0416 Mus musculus Mus_musculus_39627536_2024_Rank001 Blood Cross-species single-cell RNA-seq analysis reveals disparate and conserved cardiac and extracardiac inflammatory responses upon heart injury. QC Analysis
Data1235 Mus musculus Mus_musculus_31835035_2019_Rank0001 Brain Cross-Species Single-Cell Analysis Reveals Divergence of the Primate Microglia Program QC Analysis
Data1236 Mus musculus Mus_musculus_34616062_2021_Rank0001 Brain Comparative cellular analysis of motor cortex in human, marmoset and mouse QC Analysis
Data1374 Mus musculus BS0001205;BS0001263 Brain Cross-Species Single-Cell Analysis Reveals Divergence of the Primate Microglia Program;Comparative cellular analysis of motor cortex in human, marmoset and mouse QC Analysis
Data1433 Mus musculus BS1751616015531 Brain A molecularly defined and spatially resolved cell atlas of the whole mouse brain QC Analysis
Data1434 Mus musculus BS1751616015532 Brain A molecularly defined and spatially resolved cell atlas of the whole mouse brain QC Analysis
Data1435 Mus musculus BS1751616015534 Brain A molecularly defined and spatially resolved cell atlas of the whole mouse brain QC Analysis
Data1437 Mus musculus BS1751616015536 Brain A molecularly defined and spatially resolved cell atlas of the whole mouse brain QC Analysis
Data1442 Mus musculus BS1751616015542 Brain A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation QC Analysis
Data1424 Mus musculus BS1751616015521 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1425 Mus musculus BS1751616015523 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1426 Mus musculus BS1751616015524 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1427 Mus musculus BS1751616015525 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1428 Mus musculus BS1751616015526 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1429 Mus musculus BS1751616015527 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1432 Mus musculus BS1751616015530 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1439 Mus musculus BS1751616015539 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1445 Mus musculus BS1751616015545 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1447 Mus musculus BS1751616015549 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1449 Mus musculus BS1751616015554 Landscape A single-cell time-lapse of mouse prenatal development from gastrula to birth QC Analysis
Data1452 Mus musculus BS1751616015557 Landscape A Panoramic View of Cell Population Dynamics in Mammalian Aging QC Analysis
Data1453 Mus musculus Tabula_Muris_Senis 23 tissues A single-cell transcriptomic atlas characterizes ageing tissues in the mouse. QC Aging Analysis

๐Ÿ“„ Overview

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โ† Back to Species Database
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